EMD-17616

Single-particle
3.1 Å
EMD-17616 Deposition: 12/06/2023
Map released: 06/12/2023
Last modified: 20/03/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-17616

Local refinement of dimeric human metapneumovirus (HMPV) N-RNA

EMD-17616

Single-particle
3.1 Å
EMD-17616 Deposition: 12/06/2023
Map released: 06/12/2023
Last modified: 20/03/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Human metapneumovirus (strain CAN97-83), Escherichia coli
Sample: Human metapneumovirus N-RNA
Fitted models: 8pdo (Avg. Q-score: 0.555)

Deposition Authors: Whitehead JD , Decool H , Leyrat C , Carrique L , Fix J, Eleouet JF, Galloux M, Renner M
Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus.
Whitehead JD , Decool H , Leyrat C , Carrique L , Fix J, Eleouet JF, Galloux M, Renner M
(2023) Nat Commun , 14 , 7627 - 7627
PUBMED: 37993464
DOI: doi:10.1038/s41467-023-43434-5
ISSN: 2041-1723
Abstract:
Human metapneumovirus (HMPV) is a major cause of respiratory illness in young children. The HMPV polymerase (L) binds an obligate cofactor, the phosphoprotein (P). During replication and transcription, the L/P complex traverses the viral RNA genome, which is encapsidated within nucleoproteins (N). An essential interaction between N and a C-terminal region of P tethers the L/P polymerase to the template. This N-P interaction is also involved in the formation of cytoplasmic viral factories in infected cells, called inclusion bodies. To define how the polymerase component P recognizes N-encapsidated RNA (N-RNA) we employed cryogenic electron microscopy (cryo-EM) and molecular dynamics simulations, coupled to activity assays and imaging of inclusion bodies in cells. We report a 2.9 Å resolution structure of a triple-complex between multimeric N, bound to both RNA and the C-terminal region of P. Furthermore, we also present cryo-EM structures of assembled N in different oligomeric states, highlighting the plasticity of N. Combined with our functional assays, these structural data delineate in molecular detail how P attaches to N-RNA whilst retaining substantial conformational dynamics. Moreover, the N-RNA-P triple complex structure provides a molecular blueprint for the design of therapeutics to potentially disrupt the attachment of L/P to its template.