EMD-19467

Composite map
Single-particle
4.2 Å
EMD-19467 Deposition: 23/01/2024
Map released: 09/10/2024
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-19467

Structure of RyR1 in detergent in open state in complex with Ca2+, ATP, caffeine and Nb9657.

EMD-19467

Composite map
Single-particle
4.2 Å
EMD-19467 Deposition: 23/01/2024
Map released: 09/10/2024
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Oryctolagus cuniculus, Vicugna pacos
Sample: Ryanodine receptor 1 complex with nanobody and FKBP12
Fitted models: 8rrw (Avg. Q-score: 0.201)

Deposition Authors: Li C, Efremov RG
Rapid small-scale nanobody-assisted purification of ryanodine receptors for cryo-EM.
Li C, Willegems K, Uchanski T, Pardon E , Steyaert J , Efremov RG
(2024) J Biol Chem , 300 , 107734 - 107734
PUBMED: 39233227
DOI: doi:10.1016/j.jbc.2024.107734
ISSN: 1083-351X
ASTM: JBCHA3
Abstract:
Ryanodine receptors (RyRs) are large Ca2+ release channels residing in the endoplasmic or sarcoplasmic reticulum membrane. Three isoforms of RyRs have been identified in mammals, the disfunction of which has been associated with a series of life-threatening diseases. The need for large amounts of native tissue or eukaryotic cell cultures limits advances in structural studies of RyRs. Here, we report a method that utilizes nanobodies to purify RyRs from only 5 mg of total protein. The purification process, from isolated membranes to cryo-EM grade protein, is achieved within 4 h on the bench, yielding protein usable for cryo-EM analysis. This is demonstrated by solving the structures of rabbit RyR1, solubilized in detergent, reconstituted into lipid nanodiscs or liposomes, and bovine RyR2 reconstituted in nanodisc, and mouse RyR2 in detergent. The reported method facilitates structural studies of RyRs directed toward drug development and is useful in cases where the amount of starting material is limited.