EMD-19562
Vimentin intermediate filament protofibril stoichiometry
EMD-19562
Subtomogram averaging20.2 Å

Map released: 10/04/2024
Last modified: 03/07/2024
Sample Organism:
Homo sapiens
Sample: Vimentin intermediate filament
Deposition Authors: Eibauer M
,
Medalia O
Sample: Vimentin intermediate filament
Deposition Authors: Eibauer M


Vimentin filaments integrate low-complexity domains in a complex helical structure.
Eibauer M
,
Weber MS
,
Kronenberg-Tenga R,
Beales CT,
Boujemaa-Paterski R
,
Turgay Y
,
Sivagurunathan S
,
Kraxner J,
Koster S,
Goldman RD,
Medalia O
(2024) Nat Struct Mol Biol , 31 , 939 - 949






(2024) Nat Struct Mol Biol , 31 , 939 - 949
Abstract:
Intermediate filaments (IFs) are integral components of the cytoskeleton. They provide cells with tissue-specific mechanical properties and are involved in numerous cellular processes. Due to their intricate architecture, a 3D structure of IFs has remained elusive. Here we use cryo-focused ion-beam milling, cryo-electron microscopy and tomography to obtain a 3D structure of vimentin IFs (VIFs). VIFs assemble into a modular, intertwined and flexible helical structure of 40 α-helices in cross-section, organized into five protofibrils. Surprisingly, the intrinsically disordered head domains form a fiber in the lumen of VIFs, while the intrinsically disordered tails form lateral connections between the protofibrils. Our findings demonstrate how protein domains of low sequence complexity can complement well-folded protein domains to construct a biopolymer with striking mechanical strength and stretchability.
Intermediate filaments (IFs) are integral components of the cytoskeleton. They provide cells with tissue-specific mechanical properties and are involved in numerous cellular processes. Due to their intricate architecture, a 3D structure of IFs has remained elusive. Here we use cryo-focused ion-beam milling, cryo-electron microscopy and tomography to obtain a 3D structure of vimentin IFs (VIFs). VIFs assemble into a modular, intertwined and flexible helical structure of 40 α-helices in cross-section, organized into five protofibrils. Surprisingly, the intrinsically disordered head domains form a fiber in the lumen of VIFs, while the intrinsically disordered tails form lateral connections between the protofibrils. Our findings demonstrate how protein domains of low sequence complexity can complement well-folded protein domains to construct a biopolymer with striking mechanical strength and stretchability.