EMD-21249

Single-particle
3.2 Å
EMD-21249 Deposition: 29/01/2020
Map released: 02/09/2020
Last modified: 23/10/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-21249

Cryo-EM structure of an activated VIP1 receptor-G protein complex

EMD-21249

Single-particle
3.2 Å
EMD-21249 Deposition: 29/01/2020
Map released: 02/09/2020
Last modified: 23/10/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Homo sapiens, synthetic construct
Sample: PACAP27-VIP1R-Gs protein complex stabilized by Nanobody 35 and NanoBiT system
Fitted models: 6vn7 (Avg. Q-score: 0.427)

Deposition Authors: Duan J, Shen D-D
Cryo-EM structure of an activated VIP1 receptor-G protein complex revealed by a NanoBiT tethering strategy.
Duan J, Shen DD, Zhou XE, Bi P , Liu QF, Tan YX, Zhuang YW , Zhang HB, Xu PY, Huang SJ , Ma SS, He XH , Melcher K , Zhang Y , Xu HE , Jiang Y
(2020) Nat Commun , 11 , 4121 - 4121
PUBMED: 32807782
DOI: doi:10.1038/s41467-020-17933-8
ISSN: 2041-1723
Abstract:
Vasoactive intestinal polypeptide receptor (VIP1R) is a widely expressed class B G protein-coupled receptor and a drug target for the treatment of neuronal, metabolic, and inflammatory diseases. However, our understanding of its mechanism of action and the potential of drug discovery targeting this receptor is limited by the lack of structural information of VIP1R. Here we report a cryo-electron microscopy structure of human VIP1R bound to PACAP27 and Gs heterotrimer, whose complex assembly is stabilized by a NanoBiT tethering strategy. Comparison with other class B GPCR structures reveals that PACAP27 engages VIP1R with its N-terminus inserting into the ligand binding pocket at the transmembrane bundle of the receptor, which subsequently couples to the G protein in a receptor-specific manner. This structure has provided insights into the molecular basis of PACAP27 binding and VIP receptor activation. The methodology of the NanoBiT tethering may help to provide structural information of unstable complexes.