EMD-27543

Single-particle
3.2 Å
EMD-27543 Deposition: 08/07/2022
Map released: 04/01/2023
Last modified: 04/01/2023
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-27543

One class of E. coli ribosome associated with Bacteroides thetaiotaomicron EF-G2

EMD-27543

Single-particle
3.2 Å
EMD-27543 Deposition: 08/07/2022
Map released: 04/01/2023
Last modified: 04/01/2023
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Bacteroides thetaiotaomicron VPI-5482
Sample: Complex of ribosome associated with Bacteroides thetaiotaomicron EF-G2

Deposition Authors: Han W , Wang C , Groisman EA , Liu J
Gut colonization by Bacteroides requires translation by an EF-G paralog lacking GTPase activity.
Han W , Peng BZ , Wang C , Townsend 2nd GE , Barry NA, Peske F , Goodman AL, Liu J , Rodnina MV, Groisman EA
(2022) EMBO J , e112372 - e112372
PUBMED: 36472247
DOI: doi:10.15252/embj.2022112372
ISSN: 1460-2075
ASTM: EMJODG
Abstract:
Protein synthesis is crucial for cell growth and survival yet one of the most energy-consuming cellular processes. How, then, do cells sustain protein synthesis under starvation conditions when energy is limited? To accelerate the translocation of mRNA-tRNAs through the ribosome, bacterial elongation factor G (EF-G) hydrolyzes energy-rich guanosine triphosphate (GTP) for every amino acid incorporated into a protein. Here, we identify an EF-G paralog-EF-G2-that supports translocation without hydrolyzing GTP in the gut commensal bacterium Bacteroides thetaiotaomicron. EF-G2's singular ability to sustain protein synthesis, albeit at slow rates, is crucial for bacterial gut colonization. EF-G2 is ~10-fold more abundant than canonical EF-G1 in bacteria harvested from murine ceca and, unlike EF-G1, specifically accumulates during carbon starvation. Moreover, we uncover a 26-residue region unique to EF-G2 that is essential for protein synthesis, EF-G2 dissociation from the ribosome, and responsible for the absence of GTPase activity. Our findings reveal how cells curb energy consumption while maintaining protein synthesis to advance fitness in nutrient-fluctuating environments.