EMD-4790

Subtomogram averaging
32.0 Å
EMD-4790 Deposition: 10/04/2019
Map released: 03/07/2019
Last modified: 21/08/2019
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-4790

In situ subtomogram average of Arp2/3 complex-mediated branch junctions from Dictyostelium discoideum

EMD-4790

Subtomogram averaging
32.0 Å
EMD-4790 Deposition: 10/04/2019
Map released: 03/07/2019
Last modified: 21/08/2019
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Dictyostelium discoideum AX2
Sample: Actin filament branch junction associated with the Arp2/3 complex within the native cellular environment of Dictyostelium discoideum

Deposition Authors: Jasnin M, Fukuda Y, Beck F
The Architecture of Traveling Actin Waves Revealed by Cryo-Electron Tomography.
Jasnin M , Beck F, Ecke M, Fukuda Y , Martinez-Sanchez A , Baumeister W, Gerisch G
(2019) Structure , 27 , 1211 - 1223.e5
PUBMED: 31230946
DOI: doi:10.1016/j.str.2019.05.009
ISSN: 0969-2126
ASTM: STRUE6
Abstract:
Actin waves are dynamic supramolecular structures involved in cell migration, cytokinesis, adhesion, and neurogenesis. Although wave-like propagation of actin networks is a widespread phenomenon, the actin architecture underlying wave propagation remained unknown. In situ cryo-electron tomography of Dictyostelium cells unveils the wave architecture and provides evidence for wave progression by de novo actin nucleation. Subtomogram averaging reveals the structure of Arp2/3 complex-mediated branch junctions in their native state, and enables quantitative analysis of the 3D organization of branching within the waves. We find an excess of branches directed toward the substrate-attached membrane, and tent-like structures at sites of branch clustering. Fluorescence imaging shows that Arp2/3 clusters follow accumulation of the elongation factor VASP. We propose that filament growth toward the membrane lifts up the actin network as the wave propagates, until depolymerization of oblique filaments at the back causes the collapse of horizontal filaments into a compact layer.