EMD-8121

Subtomogram averaging
44.0 Å
EMD-8121 Deposition: 19/07/2016
Map released: 12/10/2016
Last modified: 07/12/2016
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-8121

The Architecture of the Cytoplasmic Region of Type III Secretion Systems

EMD-8121

Subtomogram averaging
44.0 Å
EMD-8121 Deposition: 19/07/2016
Map released: 12/10/2016
Last modified: 07/12/2016
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Salmonella enterica subsp. enterica serovar Typhimurium
Sample: The needle complex of Shigella flexneri

Deposition Authors: Makino F, Blocker A
The Architecture of the Cytoplasmic Region of Type III Secretion Systems
Makino F, Shen D, Kajimura N, Kawamoto A , Pissaridou P , Oswin H, Pain M, Murillo I, Namba K, Blocker AJ
(2016) Sci Rep , 6 , 33341 - 33341
PUBMED: 27686865
DOI: doi:10.1038/srep33341
ISSN: 2045-2322
Abstract:
Type III secretion systems (T3SSs) are essential devices in the virulence of many Gram-negative bacterial pathogens. They mediate injection of protein effectors of virulence from bacteria into eukaryotic host cells to manipulate them during infection. T3SSs involved in virulence (vT3SSs) are evolutionarily related to bacterial flagellar protein export apparatuses (fT3SSs), which are essential for flagellar assembly and cell motility. The structure of the external and transmembrane parts of both fT3SS and vT3SS is increasingly well-defined. However, the arrangement of their cytoplasmic and inner membrane export apparatuses is much less clear. Here we compare the architecture of the cytoplasmic regions of the vT3SSs of Shigella flexneri and the vT3SS and fT3SS of Salmonella enterica serovar Typhimurium at ~5 and ~4 nm resolution using electron cryotomography and subtomogram averaging. We show that the cytoplasmic regions of vT3SSs display conserved six-fold symmetric features including pods, linkers and an ATPase complex, while fT3SSs probably only display six-fold symmetry in their ATPase region. We also identify other morphological differences between vT3SSs and fT3SSs, such as relative disposition of their inner membrane-attached export platform, C-ring/pods and ATPase complex. Finally, using classification, we find that both types of apparatuses can loose elements of their cytoplasmic region, which may therefore be dynamic.