DNA-PK complex of DNA end processing
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7sgl
Q-score: 0.445
Liu L, Chen X, Li J, Wang H, Buehl CJ, Goff NJ, Meek K, Yang W, Gellert M
Mol Cell (2022) 82 pp. 177- [ Pubmed: 34936881 DOI: doi:10.1016/j.molcel.2021.11.025 ]
- Dna-dependent protein kinase catalytic subunit (469 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Protein artemis (79 kDa, Protein from Homo sapiens)
- Complex of dna-pkcs, ku70, ku80, artemis and dna (720 kDa, Complex)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- X-ray repair cross-complementing protein 6 (70 kDa, Protein from Homo sapiens)
- Inositol hexakisphosphate (660 Da, Ligand)
- Hairpin_1 (16 kDa, DNA from synthetic construct)
- X-ray repair cross-complementing protein 5 (82 kDa, Protein from Homo sapiens)
FATKIN domain of the phosphorylated DNA-PKcs
Liu L, Chen X, Li J, Wang H, Buehl CJ, Goff NJ, Meek K, Yang W, Gellert M
Mol Cell (2022) 82 pp. 177-189.e4 [ Pubmed: 34936881 DOI: doi:10.1016/j.molcel.2021.11.025 ]
- Ku80 (Protein from Homo sapiens)
- Dna-pkcs/ku/artemis/dna complex (720 kDa, Complex)
- Hairpin_1 (DNA from synthetic construct)
- Ku70 (Protein from Homo sapiens)
- Protein artemis (Protein from Homo sapiens)
- Dna-pkcs (Protein from Homo sapiens)
KU, Artemis, DNA and DNA-PKcs_Nheat in the NHEJ DNA end processing complex
Liu L, Chen X, Li J, Wang H, Buehl CJ, Goff NJ, Meek K, Yang W, Gellert M
Mol Cell (2022) 82 pp. 177-189.e4 [ Pubmed: 34936881 DOI: doi:10.1016/j.molcel.2021.11.025 ]
- Ku80 (Protein from Homo sapiens)
- Artemis (Protein from Homo sapiens)
- Hairpin_1 (DNA from synthetic construct)
- Ku70 (Protein from Homo sapiens)
- Complex of dna-pkcs, ku70, ku80, artemis and dna (720 kDa, Complex)
- Dna-pkcs (Protein from Homo sapiens)
CryoEM structure of DNA-PK complex VII
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7su3
Q-score: 0.528
Liu L, Chen X, Li J, Wang H, Buehl CJ, Goff NJ, Meek K, Yang W, Gellert M
Mol Cell (2022) 82 pp. 177- [ Pubmed: 34936881 DOI: doi:10.1016/j.molcel.2021.11.025 ]
- Dna (5'-d(*gp*cp*ap*tp*gp*cp*tp*cp*tp*ap*cp*tp*gp*cp*tp*tp*cp*gp*ap*tp*ap*tp*cp*g)-3') (7 kDa, DNA from Escherichia coli)
- Dna (5'-d(*ap*ap*gp*cp*ap*gp*tp*ap*gp*ap*g)-3') (4 kDa, DNA from Escherichia coli)
- X-ray repair cross-complementing protein 6 (69 kDa, Protein from Homo sapiens)
- Dna-pk complex vii (Complex)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dna-dependent protein kinase catalytic subunit (469 kDa, Protein from Homo sapiens)
- Inositol hexakisphosphate (660 Da, Ligand)
- X-ray repair cross-complementing protein 5 (82 kDa, Protein from Homo sapiens)
CryoEM structure of DNA-PK complex VIII
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7sud
Q-score: 0.403
Liu L, Chen X, Li J, Wang H, Buehl CJ, Goff NJ, Meek K, Yang W, Gellert M
Mol Cell (2022) 82 pp. 177- [ Pubmed: 34936881 DOI: doi:10.1016/j.molcel.2021.11.025 ]
- Dna-dependent protein kinase catalytic subunit (469 kDa, Protein from Homo sapiens)
- Dna-pk (Complex)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- X-ray repair cross-complementing protein 5 (82 kDa, Protein from Homo sapiens)