ClpXP from Neisseria meningitidis - Conformation A
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6vfs
Q-score: 0.301
Ripstein ZA, Vahidi S, Houry WA, Rubinstein JL, Kay LE
eLife (2020) 9 [ Pubmed: 31916936 DOI: doi:10.7554/eLife.52158 ]
- Magnesium ion (24 Da, Ligand)
- Atp-dependent clp protease atp-binding subunit clpx, atp-dependent clp protease proteolytic subunit (Complex from Neisseria meningitidis)
- Atp-dependent clp protease proteolytic subunit (22 kDa, Protein from Neisseria meningitidis)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Unidentified protein substrate (613 Da, Protein from Escherichia coli BL21(DE3))
- Un-identified protein substrate (Complex from Escherichia coli)
- Atp-dependent clp protease atp-binding subunit clpx (45 kDa, Protein from Neisseria meningitidis)
- Clpxp complex (860 kDa, Complex)
ClpXP from Neisseria meningitidis - Conformation B
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6vfx
Q-score: 0.413
Ripstein ZA, Vahidi S, Houry WA, Rubinstein JL, Kay LE
eLife (2020) 9 [ Pubmed: 31916936 DOI: doi:10.7554/eLife.52158 ]
- Magnesium ion (24 Da, Ligand)
- Atp-dependent clp protease atp-binding subunit clpx, atp-dependent clp protease proteolytic subunit (Complex from Neisseria meningitidis)
- Atp-dependent clp protease proteolytic subunit (22 kDa, Protein from Neisseria meningitidis)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Atp-dependent clp protease atp-binding subunit clpx (45 kDa, Protein from Neisseria meningitidis)
- Unidentified peptide substrate (613 Da, Protein from Escherichia coli BL21(DE3))
- Clpxp complex (860 kDa, Complex)
- Unidentified peptide substrate (Complex from Escherichia coli)
ClpXP from N. meningitidis- D7 symmetry applied
Ripstein ZA, Vahidi S, Houry WA, Rubinstein JL, Kay LE
eLife (2020) 9 [ Pubmed: 31916936 DOI: doi:10.7554/eLife.52158 ]
- Clpxp complex (860 kDa, Complex from Neisseria meningitidis)
Ripstein ZA, Vahidi S, Houry WA, Rubinstein JL, Kay LE
eLife (2020) 9 [ Pubmed: 31916936 DOI: doi:10.7554/eLife.52158 ]
- Clpxp complex (860 kDa, Complex from Neisseria meningitidis)
cryo-EM density map of ClpP from Staphylococcus aureus (Wild Type)
Vahidi S, Ripstein ZA, Bonomi M, Yuwen T, Mabanglo MF, Juravsky JB, Rizzolo K, Velyvis A, Houry WA, Vendruscolo M, Rubinstein JL, Kay LE
PNAS (2018) 115 pp. E6447-E6456 [ DOI: doi:10.1073/pnas.1805125115 Pubmed: 29941580 ]
cryo-EM density map of ClpP from Staphylococcus aureus with bound Acyldepsipeptide (V7A mutant)
Vahidi S, Ripstein ZA, Bonomi M, Yuwen T, Mabanglo MF, Juravsky JB, Rizzolo K, Velyvis A, Houry WA, Vendruscolo M, Rubinstein JL, Kay LE
PNAS (2018) 115 pp. E6447-E6456 [ DOI: doi:10.1073/pnas.1805125115 Pubmed: 29941580 ]
Caseinolytic protease (ClpP) from Staphylococcus aureus mutant - V7A
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6dkf
Q-score: 0.436
Vahidi S, Ripstein ZA, Bonomi M, Yuwen T, Mabanglo MF, Juravsky JB, Rizzolo K, Velyvis A, Houry WA, Vendruscolo M, Rubinstein JL, Kay LE
PNAS (2018) 115 pp. E6447-E6456 [ DOI: doi:10.1073/pnas.1805125115 Pubmed: 29941580 ]