V-ATPase from Saccharomyces cerevisiae, State 3
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7tmt
Q-score: 0.408
Vasanthakumar T, Keon KA, Bueler SA, Jaskolka MC, Rubinstein JL
Nat Struct Mol Biol (2022) 29 pp. 430-439 [ Pubmed: 35469063 DOI: doi:10.1038/s41594-022-00757-z ]
- V-type proton atpase subunit d (39 kDa, Protein from Saccharomyces cerevisiae)
- V0 assembly protein 1 (29 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit e (8 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit c' (17 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- V-type proton atpase subunit c (44 kDa, Protein from Saccharomyces cerevisiae)
- Yeast v-atpase subunit f (9 kDa, Protein from Saccharomyces cerevisiae)
- V-atpase subunit e (26 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit g (12 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit c (16 kDa, Protein from Saccharomyces cerevisiae)
- Vacuolar proton pump subunit b (57 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (29 kDa, Protein from Saccharomyces cerevisiae)
- H(+)-transporting two-sector atpase (67 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit f (13 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit h (54 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit a, vacuolar isoform (95 kDa, Protein from Saccharomyces cerevisiae)
- V-atpase, state 3 (990 kDa, Complex from Saccharomyces cerevisiae)
- V-type proton atpase subunit c'' (22 kDa, Protein from Saccharomyces cerevisiae)
V-ATPase from Saccharomyces cerevisiae, State 1
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7tmr
Q-score: 0.45
Vasanthakumar T, Keon KA, Bueler SA, Jaskolka MC, Rubinstein JL
Nat Struct Mol Biol (2022) 29 pp. 430-439 [ Pubmed: 35469063 DOI: doi:10.1038/s41594-022-00757-z ]
- V-type proton atpase subunit c'' (22 kDa, Protein from Saccharomyces cerevisiae)
- V0 assembly protein 1 (29 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (39 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit c' (17 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- V-type proton atpase subunit c (44 kDa, Protein from Saccharomyces cerevisiae)
- Yeast v-atpase subunit f (9 kDa, Protein from Saccharomyces cerevisiae)
- V-atpase, state 1 (990 kDa, Complex from Saccharomyces cerevisiae)
- V-type proton atpase subunit g (12 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit c (16 kDa, Protein from Saccharomyces cerevisiae)
- Vacuolar proton pump subunit b (57 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (29 kDa, Protein from Saccharomyces cerevisiae)
- H(+)-transporting two-sector atpase (67 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit f (13 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit h (54 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit a, vacuolar isoform (95 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit e (8 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit e (26 kDa, Protein from Saccharomyces cerevisiae)
V-ATPase from Saccharomyces cerevisiae, State 2
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7tms
Q-score: 0.431
Vasanthakumar T, Keon KA, Bueler SA, Jaskolka MC, Rubinstein JL
Nat Struct Mol Biol (2022) 29 pp. 430-439 [ Pubmed: 35469063 DOI: doi:10.1038/s41594-022-00757-z ]
- V-type proton atpase subunit d (39 kDa, Protein from Saccharomyces cerevisiae)
- V0 assembly protein 1 (29 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit c' (17 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- V-type proton atpase subunit c (44 kDa, Protein from Saccharomyces cerevisiae)
- Yeast v-atpase subunit f (9 kDa, Protein from Saccharomyces cerevisiae)
- V-atpase subunit e (26 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit g (12 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit c (16 kDa, Protein from Saccharomyces cerevisiae)
- Vacuolar proton pump subunit b (57 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (29 kDa, Protein from Saccharomyces cerevisiae)
- H(+)-transporting two-sector atpase (67 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit f (13 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit h (54 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit a, vacuolar isoform (95 kDa, Protein from Saccharomyces cerevisiae)
- V-atpase, state 2 (990 kDa, Complex from Saccharomyces cerevisiae)
- V-type proton atpase subunit e (8 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit c'' (22 kDa, Protein from Saccharomyces cerevisiae)
Complete V1 Complex from Saccharomyces cerevisiae
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7tmm
Q-score: 0.485
Vasanthakumar T, Keon KA, Bueler SA, Jaskolka MC, Rubinstein JL
Nat Struct Mol Biol (2022) 29 pp. 430-439 [ Pubmed: 35469063 DOI: doi:10.1038/s41594-022-00757-z ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- V-type proton atpase subunit c (44 kDa, Protein from Saccharomyces cerevisiae)
- V-atpase subunit e (26 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit g (12 kDa, Protein from Saccharomyces cerevisiae)
- Vacuolar proton pump subunit b (57 kDa, Protein from Saccharomyces cerevisiae)
- H(+)-transporting two-sector atpase (70 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (29 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit f (13 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit h (54 kDa, Protein from Saccharomyces cerevisiae)
- Complete v1 complex (635 kDa, Complex from Saccharomyces cerevisiae)
V1 complex lacking subunit C from Saccharomyces cerevisiae, State 1
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7tmo
Q-score: 0.476
Vasanthakumar T, Keon KA, Bueler SA, Jaskolka MC, Rubinstein JL
Nat Struct Mol Biol (2022) 29 pp. 430-439 [ Pubmed: 35469063 DOI: doi:10.1038/s41594-022-00757-z ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- V1 complex without subunit c, state 1 (590 kDa, Complex from Saccharomyces cerevisiae)
- V-type proton atpase subunit g (12 kDa, Protein from Saccharomyces cerevisiae)
- Vacuolar proton pump subunit b (57 kDa, Protein from Saccharomyces cerevisiae)
- H(+)-transporting two-sector atpase (70 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (29 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- V-type proton atpase subunit f (13 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- V-type proton atpase subunit h (54 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit e (26 kDa, Protein from Saccharomyces cerevisiae)
V1 complex lacking subunit C from Saccharomyces cerevisiae, State 2
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7tmp
Q-score: 0.492
Vasanthakumar T, Keon KA, Bueler SA, Jaskolka MC, Rubinstein JL
Nat Struct Mol Biol (2022) 29 pp. 430-439 [ Pubmed: 35469063 DOI: doi:10.1038/s41594-022-00757-z ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- V1 complex without subunit c, state 2 (590 kDa, Complex from Saccharomyces cerevisiae)
- V-atpase subunit e (26 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit g (12 kDa, Protein from Saccharomyces cerevisiae)
- Vacuolar proton pump subunit b (57 kDa, Protein from Saccharomyces cerevisiae)
- H(+)-transporting two-sector atpase (70 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (29 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit f (13 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- V-type proton atpase subunit h (54 kDa, Protein from Saccharomyces cerevisiae)
V1 complex lacking subunit C from Saccharomyces cerevisiae, State 3
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7tmq
Q-score: 0.503
Vasanthakumar T, Keon KA, Bueler SA, Jaskolka MC, Rubinstein JL
Nat Struct Mol Biol (2022) 29 pp. 430-439 [ Pubmed: 35469063 DOI: doi:10.1038/s41594-022-00757-z ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- V-type proton atpase subunit g (12 kDa, Protein from Saccharomyces cerevisiae)
- Vacuolar proton pump subunit b (57 kDa, Protein from Saccharomyces cerevisiae)
- H(+)-transporting two-sector atpase (70 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit d (29 kDa, Protein from Saccharomyces cerevisiae)
- V-type proton atpase subunit f (13 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- V-type proton atpase subunit h (54 kDa, Protein from Saccharomyces cerevisiae)
- V1 complex without subunit c, state 3 (590 kDa, Complex from Saccharomyces cerevisiae)
- V-type proton atpase subunit e (26 kDa, Protein from Saccharomyces cerevisiae)
Tetradecameric PilQ bound by TsaP heptamer from Pseudomonas aeruginosa
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6ve2
Q-score: 0.302
McCallum M, Tammam S, Rubinstein JL, Burrows LL, Howell PL
Structure (2021) 29 pp. 457- [ DOI: doi:10.1016/j.str.2020.11.019 Pubmed: 33338410 ]
- Fimbrial assembly protein pilq (79 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Lysm domain-containing protein (37 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Pilq with tsap (Complex from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Tetradecameric PilQ from Pseudomonas aeruginosa
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6ve3
Q-score: 0.306
McCallum M, Tammam S, Rubinstein JL, Burrows LL, Howell PL
Structure (2021) 29 pp. 457- [ DOI: doi:10.1016/j.str.2020.11.019 Pubmed: 33338410 ]
- Fimbrial assembly protein pilq (79 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Tetradecameric pilq from pseudomonas aeruginosa (Complex from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Pentadecameric PilQ from Pseudomonas aeruginosa
Resolution: 6.9 Å
EM Method: Single-particle
Fitted PDBs: 6ve4
Q-score: 0.201
McCallum M, Tammam S, Rubinstein JL, Burrows LL, Howell PL
Structure (2021) 29 pp. 457- [ DOI: doi:10.1016/j.str.2020.11.019 Pubmed: 33338410 ]
- Fimbrial assembly protein pilq (79 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Pentadecameric pilq from pseudomonas aeruginosa (Complex from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))