Structural organization of the palisade layer in isolated vaccinia virus cores
Structural organization of the palisade layer in intracellular mature vaccinia virions
Structure of Lassa virus polymerase bound to Z matrix protein
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7ckl
Q-score: 0.343
Xu X, Peng R, Peng Q, Wang M, Xu Y, Liu S, Tian X, Deng H, Tong Y, Hu X, Zhong J, Wang P, Qi J, Gao GF, Shi Y
Nat Microbiol (2021) 6 pp. 921-931 [ DOI: doi:10.1038/s41564-021-00916-w ]
- Zinc ion (65 Da, Ligand)
- Rna-directed rna polymerase l (253 kDa, Protein from Lassa mammarenavirus)
- Lassa virus polymerase in complex with z matrix protein (260 kDa, Complex from Lassa mammarenavirus)
- Manganese (ii) ion (54 Da, Ligand)
- Ring finger protein z (10 kDa, Protein from Lassa mammarenavirus)
Structure of Machupo virus polymerase bound to Z matrix protein (monomeric complex)
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 7ckm
Q-score: 0.491
Xu X, Peng R, Peng Q, Wang M, Xu Y, Liu S, Tian X, Deng H, Tong Y, Hu X, Zhong J, Wang P, Qi J, Gao GF, Shi Y
Nat Microbiol (2021) 6 pp. 921-931 [ DOI: doi:10.1038/s41564-021-00916-w ]
- Rna-directed rna polymerase l (250 kDa, Protein from Machupo virus)
- Zinc ion (65 Da, Ligand)
- Manganese (ii) ion (54 Da, Ligand)
- Ring finger protein z (10 kDa, Protein from Machupo virus)
- Machupo virus polymerase in complex with z matrix protein (260 kDa, Complex from Machupo mammarenavirus)
Structure of Machupo virus L polymerase in complex with Z protein and 3'-vRNA (dimeric complex)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7el9
Q-score: 0.415
Xu X, Peng R, Peng Q, Wang M, Xu Y, Liu S, Tian X, Deng H, Tong Y, Hu X, Zhong J, Wang P, Qi J, Gao GF, Shi Y
Nat Microbiol (2021) 6 pp. 921-931 [ DOI: doi:10.1038/s41564-021-00916-w Pubmed: 34127846 ]
- Zinc ion (65 Da, Ligand)
- Ring finger protein z (10 kDa, Protein from Machupo mammarenavirus)
- Machupo virus polymerase (Complex)
- Machupo virus polymerase in complex with z martix protein and 3'-vrna in dimeric form. (580 kDa, Complex from Machupo mammarenavirus)
- Machupo virus 3'-vrna promoter (Complex from Machupo mammarenavirus)
- Machupo virus 3'-vrna promoter (6 kDa, RNA from Machupo mammarenavirus)
- Rna-directed rna polymerase l (250 kDa, Protein from Machupo mammarenavirus)
- Machupo virus z matrix protein (Complex)
- Manganese (ii) ion (54 Da, Ligand)
Structure of Lassa virus polymerase in complex with 3'-vRNA and Z mutant (F36A)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ela
Q-score: 0.447
Xu X, Peng R, Peng Q, Wang M, Xu Y, Liu S, Tian X, Deng H, Tong Y, Hu X, Zhong J, Wang P, Qi J, Gao GF, Shi Y
Nat Microbiol (2021) 6 pp. 921-931 [ DOI: doi:10.1038/s41564-021-00916-w Pubmed: 34127846 ]
- Zinc ion (65 Da, Ligand)
- Ring finger protein z (10 kDa, Protein from Lassa mammarenavirus)
- Rna-directed rna polymerase l (253 kDa, Protein from Lassa mammarenavirus)
- Lassa virus z protein (Complex)
- Lassa virus polymerase (Complex)
- 3-'vrna promoter (Complex from Lassa mammarenavirus)
- Lassa virus polymerase in complex with 3'-vrna and z mutant (f36a). (270 kDa, Complex from Lassa mammarenavirus)
- Manganese (ii) ion (54 Da, Ligand)
- 3-'vrna promoter (6 kDa, RNA from Lassa mammarenavirus)
Structure of Machupo virus L polymerase in complex with Z protein (dimeric form)
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7elb
Q-score: 0.229
Xu X, Peng R, Peng Q, Wang M, Xu Y, Liu S, Tian X, Deng H, Tong Y, Hu X, Zhong J, Wang P, Qi J, Gao GF, Shi Y
Nat Microbiol (2021) 6 pp. 921-931 [ DOI: doi:10.1038/s41564-021-00916-w Pubmed: 34127846 ]
- Zinc ion (65 Da, Ligand)
- Machupo virus polymerase (Complex from Machupo mammarenavirus)
- Ring finger protein z (10 kDa, Protein from Machupo mammarenavirus)
- Machupo virus polymerase in complex with z protein (dimeric form). (580 kDa, Complex from Machupo mammarenavirus)
- Rna-directed rna polymerase l (250 kDa, Protein from Machupo mammarenavirus)
- Machupo virus z matrix protein (Complex)
- Manganese (ii) ion (54 Da, Ligand)
Monomeric complex of MACV L bound to Z and 3'-vRNA
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7elc
Q-score: 0.501
Xu X, Peng R, Peng Q, Wang M, Xu Y, Liu S, Tian X, Deng H, Tong Y, Hu X, Zhong J, Wang P, Qi J, Gao GF, Shi Y
Nat Microbiol (2021) 6 pp. 921-931 [ DOI: doi:10.1038/s41564-021-00916-w Pubmed: 34127846 ]
- Zinc ion (65 Da, Ligand)
- Machupo virus polymerse (Complex from Machupo mammarenavirus)
- Ring finger protein z (10 kDa, Protein from Machupo mammarenavirus)
- Machupo virus polymerase in complex with z matrix protein and 3'-vrna in monomeric form (270 kDa, Complex from Machupo mammarenavirus)
- Rna-directed rna polymerase l (250 kDa, Protein from Machupo mammarenavirus)
- 3'-vrna promoter (Complex)
- Manganese (ii) ion (54 Da, Ligand)
- 3'-vrna promoter (6 kDa, RNA from Machupo mammarenavirus)
- Machupo virus z martix protein (Complex)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7bw6
Q-score: 0.409
Sun J, Liu C, Peng R, Zhang FK, Tong Z, Liu S, Shi Y, Zhao Z, Zeng WB, Gao GF, Shen HJ, Yang X, Luo M, Qi J, Wang P
Nat Commun (2020) 11 pp. 4795-4795 [ Pubmed: 32963252 DOI: doi:10.1038/s41467-020-18537-y ]
- Triplex capsid protein 2 (34 kDa, Protein from Human herpesvirus 3)
- Major capsid protein (155 kDa, Protein from Human herpesvirus 3)
- Triplex capsid protein 1 (54 kDa, Protein from Human herpesvirus 3)
- Human alphaherpesvirus 3 (Virus from Human alphaherpesvirus 3)
- Small capsomere-interacting protein (24 kDa, Protein from Human herpesvirus 3)