Dimer-AB and Fab-hl complex of HBcAg
Resolution: 3.61 Å
EM Method: Single-particle
Fitted PDBs: 8zrr
Q-score: 0.299
Yan H, Liu C, Li Y, Tang S, Guo H, Zhou B, Fan Q, Wang H, Ge X, Wang X, Liao X, Li J, Zhang Z, Ju B
J Virol (2025) 99 pp. e0169424-e0169424 [ DOI: doi:10.1128/jvi.01694-24 Pubmed: 39601613 ]
- Heacy chain of d4 fab (13 kDa, Protein from Homo sapiens)
- Dimer-ab and fab-hl from hbcag-d4 fab complex (Complex from Homo sapiens)
- Light chain of d4 fab (12 kDa, Protein from Homo sapiens)
- Capsid protein (16 kDa, Protein from hepatitis B virus genotype C)
Local map of Omicron Subvariant JN.1 RBD with ACE2
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 8zbq
Q-score: 0.499
Inactive mu opioid receptor bound to Nb6, naloxone and NAM
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 9bjk
Q-score: 0.491
O'Brien ES, Rangari VA, El Daibani A, Eans SO, Hammond HR, White E, Wang H, Shiimura Y, Krishna Kumar K, Jiang Q, Appourchaux K, Huang W, Zhang C, Kennedy BJ, Mathiesen JM, Che T, McLaughlin JP, Majumdar S, Kobilka BK
Nature (2024) 631 pp. 686-693 [ Pubmed: 38961287 DOI: doi:10.1038/s41586-024-07587-7 ]
- Nalpha-[({(1m)-1-[5-(benzyloxy)pyridin-3-yl]naphthalen-2-yl}sulfanyl)acetyl]-3-methoxy-n,4-dimethyl-l-phenylalaninamide (605 Da, Ligand)
- Kappa opioid receptor nanobody 6 (14 kDa, Protein from Lama glama)
- Mu-type opioid receptor with kappa-type opioid receptor icl3 in complex with nb6, naloxone and a negative allosteric modulator (Complex from Mus musculus)
- Mu-type opioid receptor (47 kDa, Protein from Mus musculus)
- Naloxone (327 Da, Ligand)
Cryo-EM structure of human urate transporter GLUT9 bound to substrate urate
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 8y65
Q-score: 0.325
Shen Z, Xu L, Wu T, Wang H, Wang Q, Ge X, Kong F, Huang G, Pan X
Nat Commun (2024) 15 pp. 5039-5039 [ DOI: doi:10.1038/s41467-024-49420-9 Pubmed: 38866775 ]
- Uric acid (168 Da, Ligand)
- Glut9 in complex with urate (Complex from Homo sapiens)
- Solute carrier family 2, facilitated glucose transporter member 9 (63 kDa, Protein from Homo sapiens)
Cryo-EM structure of human urate transporter GLUT9 bound to inhibitor apigenin
Structure of MPXV B6 and D68 fab complex
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 8xs3
Q-score: 0.424
Zhao R, Wu L, Sun J, Liu D, Han P, Gao Y, Zhang Y, Xu Y, Qu X, Wang H, Chai Y, Chen Z, Gao GF, Wang Q
Nat Commun (2024) 15 pp. 4660-4660 [ Pubmed: 38821921 DOI: doi:10.1038/s41467-024-48312-2 ]
- D68_heavy chain (23 kDa, Protein from Homo sapiens)
- D68_light chain (24 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Structure of mpxv b6 complexed with d68 fab (Complex from Homo sapiens)
- Protein opg190 (28 kDa, Protein from Monkeypox virus)
Resolution: 2.86 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sz4
Q-score: 0.344
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Gdp-bound human dynamin helical polymer assembled on the membrane (85 MDa, Complex from Homo sapiens)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)
Resolution: 2.84 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sz7
Q-score: 0.308
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ Pubmed: 38663399 DOI: doi:10.1016/j.devcel.2024.04.008 ]
- Gdp-bound human dynamin helical polymer assembled on the membrane (85 MDa, Complex from Homo sapiens)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)
Cryo-EM structure of alpha-synuclein gS87 fibril
Resolution: 3.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 8jex
Q-score: 0.537
Hu J, Xia W, Zeng S, Lim YJ, Tao Y, Sun Y, Zhao L, Wang H, Le W, Li D, Zhang S, Liu C, Li YM
Nat Commun (2024) 15 pp. 2677-2677 [ DOI: doi:10.1038/s41467-024-46898-1 Pubmed: 38538591 ]
- Alpha-synuclein (14 kDa, Protein from Homo sapiens)
- Unverified amino acid chain (783 Da, Protein from Homo sapiens)
- Cryo-em structure of alpha-synuclein gs87 fibril (Cellular component from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of alpha-synuclein pS87 fibril
Resolution: 2.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 8jey
Q-score: 0.587