Tubulin heterodimer structure of GMPCPP state in solution
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ysn
Q-score: 0.355
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ DOI: doi:10.1038/s41467-023-41615-w Pubmed: 37749104 ]
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Tubulin heterodimer structure of gmpcpp state in solution (110 kDa, Complex from Sus scrofa)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
Tubulin heterodimer structure of GDP-1 state in solution
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7yso
Q-score: 0.35
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ DOI: doi:10.1038/s41467-023-41615-w Pubmed: 37749104 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Tubulin heterodimer structure of gdp-1 state in solution (110 kDa, Complex from Sus scrofa)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
Tubulin heterodimer structure of GDP-2 state in solution
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ysp
Q-score: 0.292
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ DOI: doi:10.1038/s41467-023-41615-w Pubmed: 37749104 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin heterodimer structure of gdp-2 state in solution (110 kDa, Complex from Sus scrofa)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
GTPgammaS Tube decorated with kinesin
Resolution: 6.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ysq
Q-score: 0.108
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ DOI: doi:10.1038/s41467-023-41615-w Pubmed: 37749104 ]
- Tubulin alpha chain (49 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-1 chain (50 kDa, Protein from Drosophila melanogaster)
- Gtpgammas-tube decorated with kinesin (440 kDa, Complex from Drosophila melanogaster)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
GTPgammaS MT decorated with kinesin
Resolution: 4.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ysr
Q-score: 0.371
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ DOI: doi:10.1038/s41467-023-41615-w Pubmed: 37749104 ]
- Tubulin alpha chain (49 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-1 chain (50 kDa, Protein from Drosophila melanogaster)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 15-protofilament gtpgammas-mt decorated with kinesin (220 kDa, Complex from Drosophila melanogaster)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
4.9 Angstrom Cryo-EM structure of human mTOR complex 2
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 5zcs
Q-score: 0.164
Chen X, Liu M, Tian Y, Li J, Qi Y, Zhao D, Wu Z, Huang M, Wong CCL, Wang HW, Wang J, Yang H, Xu Y
Cell Res (2018) 28 pp. 518-528 [ Pubmed: 29567957 DOI: doi:10.1038/s41422-018-0029-3 ]
- Target of rapamycin complex 2 subunit mapkap1 (55 kDa, Protein from Homo sapiens)
- Human mtor complex 2 (1 GDa, Complex from Homo sapiens)
- Serine/threonine-protein kinase mtor (289 kDa, Protein from Homo sapiens)
- Rapamycin-insensitive companion of mtor (175 kDa, Protein from Homo sapiens)
- Target of rapamycin complex subunit lst8 (35 kDa, Protein from Homo sapiens)
Cryo-EM structure of ATP-bound Vps4 mutant-E233Q complex with Vta1 (unmasked)
Sun S, Li L, Yang F, Wang X, Fan F, Yang M, Chen C, Li X, Wang HW, Sui SF
Nat Commun (2017) 8 pp. 16064-16064 [ DOI: doi:10.1038/ncomms16064 Pubmed: 28714467 ]
- Vacuolar protein sorting-associated protein 4 (48 kDa, Protein from Saccharomyces cerevisiae S288c)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Vacuolar protein sorting-associated protein vta1 (37 kDa, Protein from Saccharomyces cerevisiae S288c)
- Vps4-e233q hexamer complexed with vta1 (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Substrate Recruitment Pathways in the Yeast Exosome by Electron Microscopy
Liu JJ, Bratkowski MA, Liu X, Niu CY, Ke A, Wang HW
Nat Struct Mol Biol (2014) 21 pp. 95-102 [ DOI: doi:10.1038/nsmb.2736 Pubmed: 24336220 ]
- Hdv-re (350 kDa, Sample)
- Rrp44 (110 kDa, Protein from Saccharomyces cerevisiae)