Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9iup
Q-score: 0.489
Feng L, Sun Z, Zhang Y, Jian F, Yang S, Xia K, Yu L, Wang J, Shao F, Wang X, Cao Y
Cell Discov (2024) 10 pp. 123-123 [ Pubmed: 39616168 DOI: doi:10.1038/s41421-024-00752-2 ]
- Kp.3 rbd in complex with ace2 (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Kp.3 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Ace2 (Complex from Homo sapiens)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9iuq
Q-score: 0.499
Feng L, Sun Z, Zhang Y, Jian F, Yang S, Xia K, Yu L, Wang J, Shao F, Wang X, Cao Y
Cell Discov (2024) 10 pp. 123-123 [ Pubmed: 39616168 DOI: doi:10.1038/s41421-024-00752-2 ]
- Kp.2 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Kp.2 rbd in complex with ace2 (Complex)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Ace2 (Complex from Homo sapiens)
JN.1 RBD with Q493E in complex with ACE2
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9iuu
Q-score: 0.509
Feng L, Sun Z, Zhang Y, Jian F, Yang S, Xia K, Yu L, Wang J, Shao F, Wang X, Cao Y
Cell Discov (2024) 10 pp. 123-123 [ Pubmed: 39616168 DOI: doi:10.1038/s41421-024-00752-2 ]
- Spike protein s1 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Angiotensin-converting enzyme 2 (69 kDa, Protein from Homo sapiens)
- Jn.1 rbd q493e (Complex from Severe acute respiratory syndrome coronavirus 2)
- Ace2 (Complex from Homo sapiens)
- Jn.1 rbd with q493e in complex with ace2 (Complex)
- Chloride ion (35 Da, Ligand)
XBB.1.5.10 RBD in complex with ACE2
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8wtd
Q-score: 0.508
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Xbb.1.5 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s2' (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Rbd in complex with ace2 (Complex)
XBB.1.5.70 spike protein in complex with ACE2
Resolution: 4.64 Å
EM Method: Single-particle
Fitted PDBs: 8wtj
Q-score: 0.202
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Xbb.1.5.70 spike protein in complex with hace2 (Complex)
- Human ace2 (Complex from Homo sapiens)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Spike glycoprotein (145 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
XBB.1.5 spike protein in complex with ACE2
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 8wrm
Q-score: 0.219
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Hace2 (Complex from Homo sapiens)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Spike glycoprotein (135 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Xbb.1.5 spike protein in complex with hace2 (Complex)
XBB.1.5.10 spike protein in complex with ACE2
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8wro
Q-score: 0.193
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Xbb.1.5.10 spike protein in complex with ace2 (Complex)
- Human ace2 (Complex from Homo sapiens)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein,spike glycoprotein,spike glycoprotein,fusion protein (145 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 XBB.1.5.70 in complex with ACE2
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 8wrh
Q-score: 0.497
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Xbb.1.5.70 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Homo sapiens)
- Ace2 (Complex from Homo sapiens)
- Sars-cov-2 xbb.1.5.70 in complex with ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s2' (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
XBB.1.5 RBD in complex with ACE2
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 8wrl
Q-score: 0.454
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Sars-cov-2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Xbb.1.5 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Spike protein s1 (26 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
SARS-CoV-2 BA.2.75 S Trimer (1 RBD Up)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7yqt
Q-score: 0.396
Cao Y, Song W, Wang L, Liu P, Yue C, Jian F, Yu Y, Yisimayi A, Wang P, Wang Y, Zhu Q, Deng J, Fu W, Yu L, Zhang N, Wang J, Xiao T, An R, Wang J, Liu L, Yang S, Niu X, Gu Q, Shao F, Hao X, Meng B, Gupta RK, Jin R, Wang Y, Xie XS, Wang X
Cell Host Microbe (2022) 30 pp. 1527- [ Pubmed: 36270286 DOI: doi:10.1016/j.chom.2022.09.018 ]