Cryo-EM structure of E. coli RNAP sigma32 complex
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 8hkc
Q-score: 0.582
Lu Q, Chen T, Wang J, Wang F, Ye W, Ma L, Wu S
Biomolecules (2023) 13 [ DOI: doi:10.3390/biom13050738 Pubmed: 37238608 ]
- Dna (54-mer) (16 kDa, DNA from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- Rna polymerase sigma factor rpoh (32 kDa, Protein from Escherichia coli K-12)
- Cryo-em structure of e. coli rnap sigma32 complex (Complex from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase subunit beta (151 kDa, Protein from Escherichia coli K-12)
- Dna (54-mer) (16 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (36 kDa, Protein from Escherichia coli K-12)
- Dna-directed rna polymerase subunit beta' (157 kDa, Protein from Escherichia coli K-12)
CryoEM Structure of Mannose Transporter ManYZ and Microcin E492 (MceA) complex
Resolution: 2.28 Å
EM Method: Single-particle
Fitted PDBs: 7dyr
Q-score: 0.633
Huang K, Zeng J, Liu X, Jiang T, Wang J
Cell Discov (2021) 7 pp. 20-20 [ DOI: doi:10.1038/s41421-021-00253-6 Pubmed: 33820910 ]
- Pts system mannose-specific eiid component (30 kDa, Protein from Escherichia coli (strain K12))
- Pts system mannose-specific eiic component (27 kDa, Protein from Escherichia coli (strain K12))
- Microcin e492 (7 kDa, Protein from Klebsiella pneumoniae)
- Manyz trimer complex with microcin e492 (mcea) (530 kDa, Complex from Escherichia coli)
- Alpha-d-mannopyranose (180 Da, Ligand)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6kz3
Q-score: 0.529
Liu C, Ma J, Wang J, Wang HW, Zhang L
J Mol Biol (2020) 432 pp. 1008-1019 [ Pubmed: 31870848 DOI: doi:10.1016/j.jmb.2019.12.008 ]
- Yebt-n (300 kDa, Complex from Escherichia coli K-12)
- Intermembrane transport protein yebt (50 kDa, Protein from Escherichia coli K-12)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6kz4
Q-score: 0.548
Liu C, Ma J, Wang J, Wang HW, Zhang L
J Mol Biol (2020) 432 pp. 1008-1019 [ Pubmed: 31870848 DOI: doi:10.1016/j.jmb.2019.12.008 ]
- Intermembrane transport protein yebt (39 kDa, Protein from Escherichia coli K-12)
- Yebt-c (300 kDa, Complex from Escherichia coli K-12)
Cryo-EM Structure of YebT in conformation 1
Liu C, Ma J, Wang J, Wang HW, Zhang L
J Mol Biol (2020) 432 pp. 1008-1019 [ Pubmed: 31870848 DOI: doi:10.1016/j.jmb.2019.12.008 ]
- Yebt (570 kDa, Complex from Escherichia coli K-12)
- Yebt (Protein from Escherichia coli K-12)
Cryo-EM structure of YebT in conformation 2
Liu C, Ma J, Wang J, Wang HW, Zhang L
J Mol Biol (2020) 432 pp. 1008-1019 [ Pubmed: 31870848 DOI: doi:10.1016/j.jmb.2019.12.008 ]
- Yebt (570 kDa, Complex from Escherichia coli K-12)
- Yebt (Protein from Escherichia coli K-12)
Domain 5-7 of YebT in conformation 2
Liu C, Ma J, Wang J, Wang HW, Zhang L
J Mol Biol (2020) 432 pp. 1008-1019 [ Pubmed: 31870848 DOI: doi:10.1016/j.jmb.2019.12.008 ]
- Yt-c (570 kDa, Complex from Escherichia coli K-12)
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 6k1h
Q-score: 0.485
Liu X, Zeng J, Huang K, Wang J
Cell Res (2019) 29 pp. 680-682 [ DOI: doi:10.1038/s41422-019-0194-z Pubmed: 31209249 ]
- Pts mannose transporter subunit iid (30 kDa, Protein from Escherichia coli str. K-12 substr. MG1655)
- Pts system mannose-specific eiic component (28 kDa, Protein from Escherichia coli (strain K12))
- Alpha-d-mannopyranose (180 Da, Ligand)
- Manyz trimer complex (176 MDa, Complex from Escherichia coli)
Cryo-EM structures of the 50S ribosome subunit bound with ObgE
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 4csu
Q-score: 0.158
Feng B, Mandava CS, Guo Q, Wang J, Cao W, Li N, Zhang Y, Zhang Y, Wang Z, Wu J, Sanyal S, Lei J, Gao N
PLoS Biol (2014) 12 pp. e1001866-e1001866 [ Pubmed: 24844575 DOI: doi:10.1371/journal.pbio.1001866 ]
- Prokaryotic 50s ribosome subunit (1 MDa, Complex from Escherichia coli K-12)
- Obge (50 kDa, Protein from Escherichia coli K-12)
- 50s-obge complex (1 MDa, Sample)