JN.1 RBD with Q493E in complex with ACE2
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9iuu
Q-score: 0.509
Feng L, Sun Z, Zhang Y, Jian F, Yang S, Xia K, Yu L, Wang J, Shao F, Wang X, Cao Y
Cell Discov (2024) 10 pp. 123-123 [ Pubmed: 39616168 DOI: doi:10.1038/s41421-024-00752-2 ]
- Spike protein s1 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Ace2 (Complex from Homo sapiens)
- Angiotensin-converting enzyme 2 (69 kDa, Protein from Homo sapiens)
- Jn.1 rbd q493e (Complex from Severe acute respiratory syndrome coronavirus 2)
- Jn.1 rbd with q493e in complex with ace2 (Complex)
- Zinc ion (65 Da, Ligand)
- Chloride ion (35 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of Ca2+-bound TMEM16A in complex with Tamsulosin
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8xlr
Q-score: 0.527
Li S, Sun W, Li S, Zhu L, Guo S, He J, Li Y, Tian C, Zhao Z, Yu T, Li J, Zhang Y, Hai Y, Wang J, Zheng Y, Wang R, Hu X, Ling S, Li H, Li Y
PNAS (2025) 122 pp. e2407493121-e2407493121 [ Pubmed: 39739807 DOI: doi:10.1073/pnas.2407493121 ]
- Tamsulosin (408 Da, Ligand)
- Hexane (86 Da, Ligand)
- Tetradecane (198 Da, Ligand)
- Anoctamin-1 (111 kDa, Protein from Mus musculus)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Structure of tamsulosin- and calcium-bound mtmem16a chloride channel (Complex from Mus musculus)
Cryo-EM structure of NRG1A(LRR) in complex with EDS1-SAG101-(ADPr-ATP)
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 8yn1
Q-score: 0.561
Huang S, Wang J, Song R, Jia A, Xiao Y, Sun Y, Wang L, Mahr D, Wu Z, Han Z, Li X, Parker JE, Chai J
Nature (2025) [ Pubmed: 39939760 DOI: doi:10.1038/s41586-024-08521-7 ]
- Senescence-associated carboxylesterase 101 (61 kDa, Protein from Arabidopsis thaliana)
- Probable disease resistance protein at5g66900 (46 kDa, Protein from Arabidopsis thaliana)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ternary complex of nrg1a(lrr) with eds1-sag101-(adpr-atp) (Complex from Arabidopsis)
- Adenosine-5-diphosphoribose (559 Da, Ligand)
- Protein eds1 (70 kDa, Protein from Arabidopsis thaliana)
Cryo-EM structure of the monomeric SPARSA gRNA-ssDNA complex
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8y7z
Q-score: 0.587
Cui N, Zhang JT, Li Z, Wei XY, Wang J, Jia N
Nat Commun (2024) 15 pp. 8610-8610 [ DOI: doi:10.1038/s41467-024-52910-5 Pubmed: 39366953 ]
- Magnesium ion (24 Da, Ligand)
- Rna (21-mer) (6 kDa, RNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Sir2 superfamily protein (66 kDa, Protein from Geobacter sulfurreducens)
- Monomeric sparsa grna-ssdna complex (Complex from Geobacter sulfurreducens)
- Dna (25-mer) (7 kDa, DNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Piwi domain protein (53 kDa, Protein from Geobacter sulfurreducens)
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA complex
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 8y80
Q-score: 0.331
Cui N, Zhang JT, Li Z, Wei XY, Wang J, Jia N
Nat Commun (2024) 15 pp. 8610-8610 [ DOI: doi:10.1038/s41467-024-52910-5 Pubmed: 39366953 ]
- Magnesium ion (24 Da, Ligand)
- Rna (21-mer) (6 kDa, RNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Sir2 superfamily protein (66 kDa, Protein from Geobacter sulfurreducens)
- Tetrameric sparsa grna-ssdna complex (Complex from Geobacter sulfurreducens)
- Dna (25-mer) (7 kDa, DNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Piwi domain protein (53 kDa, Protein from Geobacter sulfurreducens)
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA-NAD+ complex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8y82
Q-score: 0.412
Cui N, Zhang JT, Li Z, Wei XY, Wang J, Jia N
Nat Commun (2024) 15 pp. 8610-8610 [ DOI: doi:10.1038/s41467-024-52910-5 Pubmed: 39366953 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine monophosphate (347 Da, Ligand)
- Rna (21-mer) (6 kDa, RNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Sir2 superfamily protein (66 kDa, Protein from Geobacter sulfurreducens)
- Dna (25-mer) (7 kDa, DNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Tetrameric sparsagrna-ssdna-nad+ complex (Complex from Geobacter sulfurreducens)
- Piwi domain protein (53 kDa, Protein from Geobacter sulfurreducens)
Resolution: 2.41 Å
EM Method: Single-particle
Fitted PDBs: 9ctq
Q-score: 0.659
Wang J, Owji AP, Kittredge A, Clark Z, Zhang Y, Yang T
Nat Commun (2024) 15 pp. 8051-8051 [ Pubmed: 39277606 DOI: doi:10.1038/s41467-024-52039-5 ]
- Calcium ion (40 Da, Ligand)
- Bestrophin-1 (67 kDa, Protein from Homo sapiens)
- Gamma-amino-butanoic acid (103 Da, Ligand)
- Gaba-bound homopentameric complex of best1 anion channel in fully open fffff state (337 kDa, Complex from Homo sapiens)
Best1 + GABA intermediate state 1
Resolution: 2.42 Å
EM Method: Single-particle
Fitted PDBs: 9ctr
Q-score: 0.651
Wang J, Owji AP, Kittredge A, Clark Z, Zhang Y, Yang T
Nat Commun (2024) 15 pp. 8051-8051 [ Pubmed: 39277606 DOI: doi:10.1038/s41467-024-52039-5 ]
- Calcium ion (40 Da, Ligand)
- Gaba-bound homopentameric complex of best1 anion channel in intermediate state 1 icccc (337 kDa, Complex from Homo sapiens)
- Gamma-amino-butanoic acid (103 Da, Ligand)
- Bestrophin-1 (67 kDa, Protein from Homo sapiens)
Best1 + GABA intermediate state 2
Resolution: 2.45 Å
EM Method: Single-particle
Fitted PDBs: 9cts
Q-score: 0.64
Wang J, Owji AP, Kittredge A, Clark Z, Zhang Y, Yang T
Nat Commun (2024) 15 pp. 8051-8051 [ Pubmed: 39277606 DOI: doi:10.1038/s41467-024-52039-5 ]
- Gaba-bound homopentameric complex of best1 anion channel in intermediate state 2 icicc (337 kDa, Complex from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Bestrophin-1 (67 kDa, Protein from Homo sapiens)
- Gamma-amino-butanoic acid (103 Da, Ligand)
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 9ctt
Q-score: 0.631
Wang J, Owji AP, Kittredge A, Clark Z, Zhang Y, Yang T
Nat Commun (2024) 15 pp. 8051-8051 [ Pubmed: 39277606 DOI: doi:10.1038/s41467-024-52039-5 ]
- Calcium ion (40 Da, Ligand)
- Bestrophin-1 (67 kDa, Protein from Homo sapiens)
- Gaba-bound homopentameric complex of best1 anion channel in fully open fffff state (337 kDa, Complex from Homo sapiens)