SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs
Yan Q, Gao X, Liu B, Hou R, He P, Ma Y, Zhang Y, Zhang Y, Li Z, Chen Q, Wang J, Huang X, Liang H, Zheng H, Yao Y, Chen X, Niu X, He J, Chen L, Zhao J, Xiong X
Nat Commun (2024) 15 pp. 7585-7585 [ DOI: doi:10.1038/s41467-024-51770-3 Pubmed: 39217172 ]
- Heavy chain of h18 fab (25 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Light chain of h18 fab (25 kDa, Protein from Homo sapiens)
- H18 fab (Complex from Homo sapiens)
- Spike glycoprotein,fibritin,expression tag (141 kDa, Protein from synthetic construct)
- Sars-cov-2 spike trimer (6p) (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike trimer (6p) in complex with three h18 fabs (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C3 symmetry)
Yan Q, Gao X, Liu B, Hou R, He P, Ma Y, Zhang Y, Zhang Y, Li Z, Chen Q, Wang J, Huang X, Liang H, Zheng H, Yao Y, Chen X, Niu X, He J, Chen L, Zhao J, Xiong X
Nat Commun (2024) 15 pp. 7585-7585 [ DOI: doi:10.1038/s41467-024-51770-3 Pubmed: 39217172 ]
- Heavy chain of h18 fab (25 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Light chain of h18 fab (25 kDa, Protein from Homo sapiens)
- H18 fab (Complex from Homo sapiens)
- Spike glycoprotein,fibritin,expression tag (141 kDa, Protein from synthetic construct)
- Sars-cov-2 spike trimer (6p) (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike trimer (6p) in complex with three h18 fabs, head-to-head aggregate (c3 symmetry) (Complex from Severe acute respiratory syndrome coronavirus 2)
GTPgammaS Tube decorated with kinesin
Resolution: 6.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ysq
Q-score: 0.108
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ DOI: doi:10.1038/s41467-023-41615-w Pubmed: 37749104 ]
- Tubulin alpha chain (49 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-1 chain (50 kDa, Protein from Drosophila melanogaster)
- Gtpgammas-tube decorated with kinesin (440 kDa, Complex from Drosophila melanogaster)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
Pom34-Pom152 membrane attachment site yeast NPC
Resolution: 7.0 Å
EM Method: Single-particle
Fitted PDBs: 8t9l
Q-score: 0.17
Akey CW, Echeverria I, Ouch C, Nudelman I, Shi Y, Wang J, Chait BT, Sali A, Fernandez-Martinez J, Rout MP
Mol Cell (2023) 83 pp. 3283-3302.e5 [ DOI: doi:10.1016/j.molcel.2023.08.025 Pubmed: 37738963 ]
- Nucleoporin pom34 (34 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin pom152 (151 kDa, Protein from Saccharomyces cerevisiae)
- Nuclear pore complex (Complex from Saccharomyces cerevisiae)
- Pom34-pom152 inner ring anchor complex (Complex from Saccharomyces cerevisiae)
Inner spoke ring of the yeast NPC
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 8tj5
Q-score: 0.113
Akey CW, Echeverria I, Ouch C, Nudelman I, Shi Y, Wang J, Chait BT, Sali A, Fernandez-Martinez J, Rout MP
Mol Cell (2023) 83 pp. 3283-3302.e5 [ DOI: doi:10.1016/j.molcel.2023.08.025 Pubmed: 37738963 ]
- Nucleoporin nup192 (191 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nup157 (156 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nup57 (57 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nic96 (96 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nsp1 (86 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nup49/nsp49 (49 kDa, Protein from Saccharomyces cerevisiae)
- Spoke connector (3 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nup53 (52 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nup170 (169 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin nup188 (188 kDa, Protein from Saccharomyces cerevisiae)
- Nucleoporin 59 (58 kDa, Protein from Saccharomyces cerevisiae)
- Nuclear pore complex (18 MDa, Complex from Saccharomyces cerevisiae)
Conformational Dynamics of the D53-D3-D14 Complex in Strigolactone Signaling
Resolution: 7.09 Å
EM Method: Single-particle
Fitted PDBs: 8if6
Q-score: 0.121
Liu S, Wang J, Song B, Gong X, Liu H, Hu Q, Zhang J, Li Q, Zheng J, Wang H, Xu HE, Li J, Wang B
Plant Cell Physiol (2023) 64 pp. 1046-1056 [ Pubmed: 37384578 DOI: doi:10.1093/pcp/pcad067 ]
- F-box/lrr-repeat max2 homolog (79 kDa, Protein from Oryza sativa subsp. japonica)
- Plant protein complex (Complex from Oryza sativa)
- Skp1-like protein 20 (19 kDa, Protein from Oryza sativa subsp. japonica)
- Strigolactone esterase d14 (33 kDa, Protein from Oryza sativa subsp. japonica)