Structure of a metalloprotease in complex with its substrate.
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 7ufg
Q-score: 0.443
Judge RA, Sridar J, Tunyasunvunakool K, Jain R, Wang JCK, Ouch C, Xu J, Mafi A, Nile AH, Remarcik C, Smith CL, Ghosh C, Xu C, Stoll V, Jumper J, Singh AH, Eaton D, Hao Q
Nat Commun (2022) 13 pp. 5500- [ Pubmed: 36127359 DOI: doi:10.1038/s41467-022-33175-2 ]
- Insulin-like growth factor-binding protein 5 (30 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Pappalysin-1 (176 kDa, Protein from Homo sapiens)
- Complex of papp-a with igfbp5 (Complex from Homo sapiens)
Structure of a metalloprotease.
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 8d8o
Q-score: 0.44
Judge RA, Sridar J, Tunyasunvunakool K, Jain R, Wang JCK, Ouch C, Xu J, Mafi A, Nile AH, Remarcik C, Smith CL, Ghosh C, Xu C, Stoll V, Jumper J, Singh AH, Eaton D, Hao Q
Nat Commun (2022) 13 pp. 5500- [ Pubmed: 36127359 DOI: doi:10.1038/s41467-022-33175-2 ]
- Papp-a homodimer (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Pappalysin-1 (176 kDa, Protein from Homo sapiens)
S protein of Delta variant in complex with ZWD12
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7wwl
Q-score: 0.444
Chi X, Guo Y, Zhang G, Sun H, Zhang J, Li M, Chen Z, Han J, Zhang Y, Zhang X, Fan P, Zhang Z, Wang B, Zai X, Han X, Hao M, Fang T, Xu J, Wu S, Chen Y, Fang Y, Dong Y, Sun B, Zhang J, Li J, Zhao G, Yu C, Zhou Q, Chen W
Signal Transduct Target Ther (2022) 7 pp. 139-139 [ Pubmed: 35478188 DOI: doi:10.1038/s41392-022-00987-z ]
- S protein of delta variant in complex with zwd12 (Complex)
- Heavy chain of zwd12 (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of delta variant (Complex from Severe acute respiratory syndrome coronavirus 2)
- Zwd12 (Complex from Homo sapiens)
- Light chain of zwd12 (11 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
S protein of Delta variant in complex with ZWC6
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7wwm
Q-score: 0.338
Chi X, Guo Y, Zhang G, Sun H, Zhang J, Li M, Chen Z, Han J, Zhang Y, Zhang X, Fan P, Zhang Z, Wang B, Zai X, Han X, Hao M, Fang T, Xu J, Wu S, Chen Y, Fang Y, Dong Y, Sun B, Zhang J, Li J, Zhao G, Yu C, Zhou Q, Chen W
Signal Transduct Target Ther (2022) 7 pp. 139-139 [ Pubmed: 35478188 DOI: doi:10.1038/s41392-022-00987-z ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of zwc6 (13 kDa, Protein from Homo sapiens)
- S protein of delta variant (Complex from Severe acute respiratory syndrome coronavirus 2)
- Zwc6 (Complex from Homo sapiens)
- Heavy chain of zwc6 (11 kDa, Protein from Homo sapiens)
- S protein of delta variant in complex with zwc6 (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
cryo EM map of the S protein of SARS-CoV-2 in complex bound with 4A8
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7c2l
Q-score: 0.362
Chi X, Yan R, Zhang J, Zhang G, Zhang Y, Hao M, Zhang Z, Fan P, Dong Y, Yang Y, Chen Z, Guo Y, Zhang J, Li Y, Song X, Chen Y, Xia L, Fu L, Hou L, Xu J, Yu C, Li J, Zhou Q, Chen W
Science (2020) 369 pp. 650-655 [ Pubmed: 32571838 DOI: doi:10.1126/science.abc6952 ]
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of sars-cov-2 in complex bound with 4a8 (Complex from Homo sapiens)
- Heavy chain of 4a8 (50 kDa, Protein from Homo sapiens)
- Light chain of 4a8 (24 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)