Cryo-EM structure of cortical microtubule from Toxoplasma gondii (with TrxL2)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7miz
Q-score: 0.46
Wang X, Fu Y, Beatty WL, Ma M, Brown A, David Sibley L, Zhang R
Nat Commun (2021) 12 pp. 3065-3065 [ Pubmed: 34031406 DOI: doi:10.1038/s41467-021-23351-1 ]
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin beta chain (50 kDa, Protein from Toxoplasma gondii)
- Microtubule associated protein spm1 (38 kDa, Protein from Toxoplasma gondii)
- Pdi family protein (24 kDa, Protein from Toxoplasma gondii)
- Cortical microtubule with associated mips (Complex from Toxoplasma gondii)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha chain (50 kDa, Protein from Toxoplasma gondii)
- Pdi family protein (21 kDa, Protein from Toxoplasma gondii)
Composite cryo-EM density map of the radial spoke 1 isolated from Chlamydomonas reinhardtii
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7jtk
Q-score: 0.501
Gui M, Ma M, Sze-Tu E, Wang X, Koh F, Zhong ED, Berger B, Davis JH, Dutcher SK, Zhang R, Brown A
Nat Struct Mol Biol (2021) 28 pp. 29-37 [ Pubmed: 33318703 DOI: doi:10.1038/s41594-020-00530-0 ]
- Flagellar radial spoke protein 10 (23 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 14 (40 kDa, Protein from Chlamydomonas reinhardtii)
- Unknown protein (2 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 16 (39 kDa, Protein from Chlamydomonas reinhardtii)
- Phosphate ion (94 Da, Ligand)
- Flagellar radial spoke protein 6 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Cytochrome b5 heme-binding domain-containing protein (26 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 23 (61 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein 8 kda light chain, flagellar outer arm (10 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 4 (49 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 3 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke 1 (Complex from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 9 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 12 (19 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 11 (21 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 1 (87 kDa, Protein from Chlamydomonas reinhardtii)
- Predicted protein (8 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 2 (77 kDa, Protein from Chlamydomonas reinhardtii)
- Uncharacterized protein (75 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 7 (54 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 5 (55 kDa, Protein from Chlamydomonas reinhardtii)
Resolution: 6.1 Å
EM Method: Single-particle
Fitted PDBs: 7jts
Q-score: 0.268
Gui M, Ma M, Sze-Tu E, Wang X, Koh F, Zhong ED, Berger B, Davis JH, Dutcher SK, Zhang R, Brown A
Nat Struct Mol Biol (2021) 28 pp. 29-37 [ Pubmed: 33318703 DOI: doi:10.1038/s41594-020-00530-0 ]
- Radial spoke protein 3 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Fap253 (75 kDa, Protein from Chlamydomonas reinhardtii)
- Stalk of radial spoke 1 (Complex from Chlamydomonas reinhardtii)
- Calmodulin (18 kDa, Protein from Chlamydomonas reinhardtii)
- Fap207 (28 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein 8 kda light chain, flagellar outer arm (10 kDa, Protein from Chlamydomonas reinhardtii)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ju4
Q-score: 0.431
Gui M, Ma M, Sze-Tu E, Wang X, Koh F, Zhong ED, Berger B, Davis JH, Dutcher SK, Zhang R, Brown A
Nat Struct Mol Biol (2021) 28 pp. 29-37 [ Pubmed: 33318703 DOI: doi:10.1038/s41594-020-00530-0 ]
- Fap253 (75 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar-associated protein 172 (101 kDa, Protein from Chlamydomonas reinhardtii)
- Fap207 (28 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex protein 1 (79 kDa, Protein from Chlamydomonas reinhardtii)
- Unknown protein (6 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex subunit 2 (64 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spike protein 8 (40 kDa, Protein from Chlamydomonas reinhardtii)
- 28 kda inner dynein arm light chain, axonemal (28 kDa, Protein from Chlamydomonas reinhardtii)
- Complex of radial spoke 2 stalk, idac, and n-drc attached with doublet microtubule (Complex from Chlamydomonas reinhardtii)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Dynein 8 kda light chain, flagellar outer arm (10 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 11 (21 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 3 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Tubulin beta (49 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar-associated protein 59 (105 kDa, Protein from Chlamydomonas reinhardtii)
- Actin (41 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex subunit 4 (55 kDa, Protein from Chlamydomonas reinhardtii)
- Cfap91 domain-containing protein (134 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 15 (35 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 7 (54 kDa, Protein from Chlamydomonas reinhardtii)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha (49 kDa, Protein from Chlamydomonas reinhardtii)
Composite cryo-EM density map of the 48-nm repeat doublet microtubule from Chlamydomonas reinhardtii
Ma M, Stoyanova M, Rademacher G, Dutcher SK, Brown A, Zhang R
Cell (2019) 179 pp. 909-922.e12 [ DOI: doi:10.1016/j.cell.2019.09.030 Pubmed: 31668805 ]
- Fap252 (39 kDa, Protein from Chlamydomonas reinhardtii)
- Fap143 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Fap20 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Rib72 (72 kDa, Protein from Chlamydomonas reinhardtii)
- Fap273 (15 kDa, Protein from Chlamydomonas reinhardtii)
- Fap363 (43 kDa, Protein from Chlamydomonas reinhardtii)
- Fap45 (59 kDa, Protein from Chlamydomonas reinhardtii)
- Pacrg (34 kDa, Protein from Chlamydomonas reinhardtii)
- Fap95 (25 kDa, Protein from Chlamydomonas reinhardtii)
- Rib21 (20 kDa, Protein from Chlamydomonas reinhardtii)
- Fap276 (10 kDa, Protein from Chlamydomonas reinhardtii)
- Fap21 (49 kDa, Protein from Chlamydomonas reinhardtii)
- Fap67 (41 kDa, Protein from Chlamydomonas reinhardtii)
- Fap141 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Fap107 (25 kDa, Protein from Chlamydomonas reinhardtii)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Rib43a (42 kDa, Protein from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Fap112 (53 kDa, Protein from Chlamydomonas reinhardtii)
- Dc2 (62 kDa, Protein from Chlamydomonas reinhardtii)
- Doublet microtubule from wild-type chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- Fap85 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Fap52 (68 kDa, Protein from Chlamydomonas reinhardtii)
- Fap68 (35 kDa, Protein from Chlamydomonas reinhardtii)
- Tubulin beta (49 kDa, Protein from Chlamydomonas reinhardtii)
- Fap127 (60 kDa, Protein from Chlamydomonas reinhardtii)
- Fap210 (53 kDa, Protein from Chlamydomonas reinhardtii)
- Rib30 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Fap115 (26 kDa, Protein from Chlamydomonas reinhardtii)
- Fap182 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Fap106 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Dc1 (83 kDa, Protein from Chlamydomonas reinhardtii)
- Fap129 (51 kDa, Protein from Chlamydomonas reinhardtii)
- Dc3 (21 kDa, Protein from Chlamydomonas reinhardtii)
- Fap90 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Fap161 (42 kDa, Protein from Chlamydomonas reinhardtii)
- Fap222 (15 kDa, Protein from Chlamydomonas reinhardtii)
- Fap166 (23 kDa, Protein from Chlamydomonas reinhardtii)
- Fap53 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Tubulin alpha (49 kDa, Protein from Chlamydomonas reinhardtii)
- Fap126 (15 kDa, Protein from Chlamydomonas reinhardtii)