Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgATP and Vi
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8vow
Q-score: 0.47
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Abc-type bacteriocin transporter (67 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
- Vanadate ion (114 Da, Ligand)
Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgADP
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 8vox
Q-score: 0.483
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Abc-type bacteriocin transporter (67 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgADP and substrate
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 8voz
Q-score: 0.561
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Magnesium ion (24 Da, Ligand)
- 3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxypropyl hexadecanoate (480 Da, Ligand)
- Abc-type bacteriocin transporter (67 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- (2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with ATP
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 8vp1
Q-score: 0.489
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Abc-type bacteriocin transporter (67 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the ABC transporter PCAT1 bound with MgADP and Substrate
Resolution: 2.96 Å
EM Method: Single-particle
Fitted PDBs: 8vp3
Q-score: 0.534
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Magnesium ion (24 Da, Ligand)
- 3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxypropyl hexadecanoate (480 Da, Ligand)
- (2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Bacteriocin-type signal sequence-containing protein (12 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Abc-type bacteriocin transporter (83 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the ABC transporter PCAT1 bound with ADP and Substrate
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 8vp5
Q-score: 0.561
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Pcat1 bound with substrate (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
- 3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxypropyl hexadecanoate (480 Da, Ligand)
- (2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Bacteriocin-type signal sequence-containing protein (12 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Abc-type bacteriocin transporter (83 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the ABC transporter PCAT1 bound with Mg_class_2
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 8vp6
Q-score: 0.525
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Abc-type bacteriocin transporter (83 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the ABC transporter PCAT1 bound with ATP and Substrate
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 8vp8
Q-score: 0.469
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Abc-type bacteriocin transporter (83 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the cysteine-free ABC transporter PCAT1 bound with ADP and Substrate
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 8vp9
Q-score: 0.475
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- 3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxypropyl hexadecanoate (480 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Bacteriocin-type signal sequence-containing protein (12 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)
- Abc-type bacteriocin transporter (83 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
Cryo-EM structure of the ABC transporter PCAT1 bound with ADP
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8vpa
Q-score: 0.546
Zhang R, Jagessar KL, Brownd M, Polasa A, Stein RA, Moradi M, Karakas E, Mchaourab HS
Nat Commun (2024) 15 pp. 9055-9055 [ Pubmed: 39428489 DOI: doi:10.1038/s41467-024-53420-0 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Abc-type bacteriocin transporter (83 kDa, Protein from Acetivibrio thermocellus ATCC 27405)
- Pcat1 (1 MDa, Complex from Acetivibrio thermocellus ATCC 27405)