Cryo-EM structure of 2:2 c-MET/HGF holo-complex
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7mo7
Q-score: 0.233
Uchikawa E, Chen Z, Xiao GY, Zhang X, Bai XC
Nat Commun (2021) 12 pp. 4074-4074 [ DOI: doi:10.1038/s41467-021-24367-3 Pubmed: 34210960 ]
- 2:2 c-met/hgf holo-complex (Complex from Homo sapiens)
- Hepatocyte growth factor (83 kDa, Protein from Homo sapiens)
- Hepatocyte growth factor receptor (155 kDa, Protein from Homo sapiens)
Cryo-EM structure of 1:1 c-MET I/HGF I complex after focused 3D refinement of holo-complex
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7mo8
Q-score: 0.324
Uchikawa E, Chen Z, Xiao GY, Zhang X, Bai XC
Nat Commun (2021) 12 pp. 4074-4074 [ DOI: doi:10.1038/s41467-021-24367-3 Pubmed: 34210960 ]
- Hepatocyte growth factor receptor (155 kDa, Protein from Homo sapiens)
- Hepatocyte growth factor (83 kDa, Protein from Homo sapiens)
- 1:1 c-met i/hgf i complex (Complex from Homo sapiens)
Cryo-EM map of the c-MET II/HGF I/HGF II (K4 and SPH) sub-complex
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7mo9
Q-score: 0.41
Uchikawa E, Chen Z, Xiao GY, Zhang X, Bai XC
Nat Commun (2021) 12 pp. 4074-4074 [ DOI: doi:10.1038/s41467-021-24367-3 Pubmed: 34210960 ]
- C-met ii/hgf i/hgf ii (k4 and sph) sub-complex (Complex from Homo sapiens)
- Hepatocyte growth factor (83 kDa, Protein from Homo sapiens)
- Hepatocyte growth factor receptor (155 kDa, Protein from Homo sapiens)
Cryo-EM structure of the c-MET II/HGF I complex bound with HGF II in a rigid conformation
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 7moa
Q-score: 0.23
Uchikawa E, Chen Z, Xiao GY, Zhang X, Bai XC
Nat Commun (2021) 12 pp. 4074-4074 [ DOI: doi:10.1038/s41467-021-24367-3 Pubmed: 34210960 ]
- The c-met ii/hgf i complex bound with hgf ii in a rigid conformation (Complex from Homo sapiens)
- Hepatocyte growth factor receptor (155 kDa, Protein from Homo sapiens)
- Hepatocyte growth factor (83 kDa, Protein from Homo sapiens)
Cryo-EM structure of 2:2 c-MET/NK1 complex
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7mob
Q-score: 0.296
Uchikawa E, Chen Z, Xiao GY, Zhang X, Bai XC
Nat Commun (2021) 12 pp. 4074-4074 [ DOI: doi:10.1038/s41467-021-24367-3 Pubmed: 34210960 ]
- Hepatocyte growth factor (24 kDa, Protein from Homo sapiens)
- Hepatocyte growth factor receptor (155 kDa, Protein from Homo sapiens)
- 2:2 c-met/nk1 complex (Complex from Homo sapiens)
Cryo-EM structure of human Cohesin-NIPBL-DNA complex
Resolution: 5.3 Å
EM Method: Single-particle
Fitted PDBs: 6wg3
Q-score: 0.239
Science (2020) 368 pp. 1454-1459 [ Pubmed: 32409525 DOI: doi:10.1126/science.abb0981 ]
- Structural maintenance of chromosomes protein 3 (141 kDa, Protein from Homo sapiens)
- Dna (51-mer) (15 kDa, DNA from Homo sapiens)
- Structural maintenance of chromosomes protein 1a (143 kDa, Protein from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Human cohesin-nipbl-dna complex (820 kDa, Complex from Homo sapiens)
- Dna (51-mer) (15 kDa, DNA from Homo sapiens)
- Double-strand-break repair protein rad21 homolog (71 kDa, Protein from Homo sapiens)
- Cohesin subunit sa-1 (146 kDa, Protein from Homo sapiens)
- Nipped-b-like protein (188 kDa, Protein from Homo sapiens)
Cryo-EM structure of human Cohesin-NIPBL-DNA complex without STAG1
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6wge
Q-score: 0.431
Science (2020) 368 pp. 1454-1459 [ Pubmed: 32409525 DOI: doi:10.1126/science.abb0981 ]
- Dna (43-mer) (13 kDa, DNA from Homo sapiens)
- Structural maintenance of chromosomes protein 3 (141 kDa, Protein from Homo sapiens)
- Structural maintenance of chromosomes protein 1a (143 kDa, Protein from Homo sapiens)
- Dna (43-mer) (13 kDa, DNA from Homo sapiens)
- Nipped-b-like protein (186 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Human cohesin-nipbl-dna complex without stag1 (820 kDa, Complex from Homo sapiens)
- Double-strand-break repair protein rad21 homolog (71 kDa, Protein from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Cryo-EM structure of a Separase-Securin complex from Caenorhabditis elegans at 3.8 A resolution
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 5mz6
Q-score: 0.417
Boland A, Martin TG, Zhang Z, Yang J, Bai XC, Chang L, Scheres SH, Barford D
Nat Struct Mol Biol (2017) 24 pp. 414-418 [ DOI: doi:10.1038/nsmb.3386 Pubmed: 28263324 ]
- Interactor of fizzy protein (27 kDa, Protein from Caenorhabditis elegans)
- Caenorhabditis elegans separase-securin complex (170 kDa, Complex from Caenorhabditis elegans)
- Separase (144 kDa, Protein from Caenorhabditis elegans)
Cryo-EM map of RyR1 in a closed state (C1 conformer)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 5gky
Q-score: 0.317
Bai XC, Yan Z, Wu JP, Li ZQ, Yan N
Cell Res (2016) 26 pp. 995-1006 [ Pubmed: 27468892 DOI: doi:10.1038/cr.2016.89 ]
- Zinc ion (65 Da, Ligand)
- Ryr1 in complex with fkbp12 (2 MDa, Complex)
- Fkbp12 (Complex from Oryctolagus cuniculus)
- Ryanodine receptor 1 (565 kDa, Protein from Oryctolagus cuniculus)
- Ryr1 (Complex from Oryctolagus cuniculus)
- Peptidyl-prolyl cis-trans isomerase fkbp1a (11 kDa, Protein from Oryctolagus cuniculus)
Cryo-EM map of RyR1 in a closed state (C3 conformer)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 5gkz
Q-score: 0.337
Bai XC, Yan Z, Wu JP, Li ZQ, Yan N
Cell Res (2016) 26 pp. 995-1006 [ Pubmed: 27468892 DOI: doi:10.1038/cr.2016.89 ]
- Zinc ion (65 Da, Ligand)
- Ryr1 in complex with fkbp12 (2 MDa, Complex)
- Fkbp12 (Complex from Oryctolagus cuniculus)
- Ryanodine receptor 1 (565 kDa, Protein from Oryctolagus cuniculus)
- Ryr1 (Complex from Oryctolagus cuniculus)
- Peptidyl-prolyl cis-trans isomerase fkbp1a (11 kDa, Protein from Oryctolagus cuniculus)