Small circular RNA dimer - Class 3
Kristoffersen EL, McRae EK, Sorensen NR, Holliger P, Andersen ES
To Be Published
- Rna (36-mer) (11 kDa, RNA from synthetic construct)
- Dimer composed of two small circular rnas and two complimentary rnas (Complex from synthetic construct)
- Rna (36-mer) (11 kDa, RNA from synthetic construct)
Small circular RNA dimer - Class 1
Resolution: 7.29 Å
EM Method: Single-particle
Fitted PDBs: 9h82
Q-score: 0.142
Kristoffersen EL, McRae EK, Sorensen NR, Holliger P, Andersen ES
To Be Published
Small circular RNA dimer - Class 2
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 9h83
Q-score: 0.126
Kristoffersen EL, McRae EK, Sorensen NR, Holliger P, Andersen ES
To Be Published
- Dimer intermediate class 2 composed of 2 circular rna and 2 complimentary rna (Complex from synthetic construct)
- Complementary strand (11 kDa, RNA from synthetic construct)
- Circular rna (11 kDa, RNA from synthetic construct)
Small circular RNA dimer - Class 4
Resolution: 9.3 Å
EM Method: Single-particle
Fitted PDBs: 9h86
Q-score: 0.124
Kristoffersen EL, McRae EK, Sorensen NR, Holliger P, Andersen ES
To Be Published
- Dimer intermediate class 2 composed of 2 circular rna and 2 complimentary rna (Complex from synthetic construct)
- Complementary strand (11 kDa, RNA from synthetic construct)
- Circular rna (11 kDa, RNA from synthetic construct)
Small circular RNA dimer - Class 5
Resolution: 9.6 Å
EM Method: Single-particle
Fitted PDBs: 9h8a
Q-score: 0.151
Kristoffersen EL, McRae EK, Sorensen NR, Holliger P, Andersen ES
To Be Published
- Complementary strand (11 kDa, RNA from synthetic construct)
- Filament comprising 4 circular and 4 linear rna complements. (Complex from synthetic construct)
- Circular rna (11 kDa, RNA from synthetic construct)
RNA origami 3-helix tile Traptamer
Resolution: 5.94 Å
EM Method: Single-particle
Fitted PDBs: 8tvz
Q-score: 0.214
Vallina NS, McRae EKS, Geary C, Andersen ES
Sci Adv (2024) 10 pp. eadk1250-eadk1250 [ Pubmed: 38507482 DOI: doi:10.1126/sciadv.adk1250 ]
- Rna (363-mer) (116 kDa, RNA from synthetic construct)
- 14-14 traptamer (Complex from synthetic construct)
Double-motif Single-stranded Paranemic Crossover RNA Triangle (2PXT)
Resolution: 6.56 Å
EM Method: Single-particle
Fitted PDBs: 8bu8
Q-score: 0.182
Sampedro Vallina N, McRae EKS, Geary C, Andersen ES
Small (2023) 19 pp. e2204651-e2204651 [ Pubmed: 36526605 DOI: doi:10.1002/smll.202204651 ]
- Rna (354-mer) (113 kDa, RNA from synthetic construct)
- Double-motif single-stranded paranemic crossover rna triangle (2pxt) (113 MDa, Complex from synthetic construct)
5TU-t1 - heterodimeric triplet polymerase ribozyme
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 8t2p
Q-score: 0.063
McRae EKS, Wan CJK, Kristoffersen EL, Hansen K, Gianni E, Gallego I, Curran JF, Attwater J, Holliger P, Andersen ES
PNAS (2024) 121 pp. e2313332121-e2313332121 [ Pubmed: 38207080 DOI: doi:10.1073/pnas.2313332121 ]
- 5tu-t1 - triplet polymerase ribozyme (92 kDa, Complex from synthetic construct)
- Rna (135-mer) (43 kDa, RNA from synthetic construct)
- Rna (152-mer) (48 kDa, RNA from synthetic construct)
Single-stranded Paranemic Crossover RNA Triangle (PXT)
Resolution: 5.39 Å
EM Method: Single-particle
Fitted PDBs: 8btz
Q-score: 0.22
Sampedro Vallina N, McRae EKS, Geary C, Andersen ES
Small (2023) 19 pp. e2204651-e2204651 [ Pubmed: 36526605 DOI: doi:10.1002/smll.202204651 ]
Twist-corrected RNA origami 5-helix Tile A
Resolution: 5.14 Å
EM Method: Single-particle
Fitted PDBs: 7qdu
Q-score: 0.27
McRae EKS, Rasmussen HO, Liu J, Boggild A, Nguyen MTA, Sampedro Vallina N, Boesen T, Pedersen JS, Ren G, Geary C, Andersen ES
Nat Nanotechnol (2023) 18 pp. 808-817 [ DOI: doi:10.1038/s41565-023-01321-6 Pubmed: 36849548 ]
- Chains: q (177 kDa, RNA from synthetic construct)
- Twist-corrected 5-helix tile a. (175 kDa, Complex from synthetic construct)