Cryo-EM structure of T. pseudonana PyShell helical tube
Resolution: 2.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 8wqp
Q-score: 0.64
Shimakawa G, Demulder M, Flori S, Kawamoto A, Tsuji Y, Nawaly H, Tanaka A, Tohda R, Ota T, Matsui H, Morishima N, Okubo R, Wietrzynski W, Lamm L, Righetto RD, Uwizeye C, Gallet B, Jouneau PH, Gerle C, Kurisu G, Finazzi G, Engel BD, Matsuda Y
Cell (2024) 187 pp. 5919- [ DOI: doi:10.1016/j.cell.2024.09.013 Pubmed: 39357521 ]
A local Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9ija
Q-score: 0.356
Tao L, Wang D, Yuan Q, Zhao F, Zhang Y, Du T, Shen S, Xu HE, Li Y, Yang D, Duan J
Cell Res (2024) 34 pp. 735-738 [ Pubmed: 38969802 DOI: doi:10.1038/s41422-024-00995-4 ]
- Cholesterol (386 Da, Ligand)
- Taste receptor type 2 member 14 (36 kDa, Protein from Homo sapiens)
- The receptor of tas2r14 (Complex from Homo sapiens)
- 4-methyl-n-[(2m)-2-(1h-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)pyrimidin-2-amine (321 Da, Ligand)
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 8xh6
Q-score: 0.446
Huang J, Zhang X, Nie X, Zhang X, Wang Y, Huang L, Geng X, Li D, Zhang L, Gao G, Gao P
Cell (2024) 187 pp. 4996-5009.e14 [ DOI: doi:10.1016/j.cell.2024.06.021 Pubmed: 38996527 ]
- Latent membrane protein 1 (18 kDa, Protein from human gammaherpesvirus 4)
- Lmp1 dimer (Complex from human gammaherpesvirus 4)
SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 8c0y
Q-score: 0.491
Sheward DJ, Pushparaj P, Das H, Greaney AJ, Kim C, Kim S, Hanke L, Hyllner E, Dyrdak R, Lee J, Dopico XC, Dosenovic P, Peacock TP, McInerney GM, Albert J, Corcoran M, Bloom JD, Murrell B, Karlsson Hedestam GB, Hallberg BM
Cell Rep Med (2024) 5 pp. 101577-101577 [ Pubmed: 38761799 DOI: doi:10.1016/j.xcrm.2024.101577 ]
- Spike protein s2' (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Cab-a17 antibody (fab) (Complex from Enterobacteria phage T4)
- Cab-a17 antibody (variable) (12 kDa, Protein from Homo sapiens)
- Sars-cov2 omicron ba.1 spike in complex with cab-a17 antibody (95 kDa, Complex)
- Cab-a17 antibody (variable) (11 kDa, Protein from Homo sapiens)
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 8v4f
Q-score: 0.513
Sheward DJ, Pushparaj P, Das H, Greaney AJ, Kim C, Kim S, Hanke L, Hyllner E, Dyrdak R, Lee J, Dopico XC, Dosenovic P, Peacock TP, McInerney GM, Albert J, Corcoran M, Bloom JD, Murrell B, Karlsson Hedestam GB, Hallberg BM
Cell Rep Med (2024) 5 pp. 101577-101577 [ Pubmed: 38761799 DOI: doi:10.1016/j.xcrm.2024.101577 ]
- Cab-a17 variable light chain (11 kDa, Protein from Homo sapiens)
- Cab-a17 variable heavy-chain (12 kDa, Protein from Homo sapiens)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Complex between fab preparation of cab-a17 and omicron ba.1 spike (Complex from Homo sapiens)
VMAT2 complex with noradrenaline in lumen-facing state
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 8jsx
Q-score: 0.541
Wu D, Yu Z, Chen Q, Zhao J, Huang B, Wang Y, Su J, Li N, Jiang D, Zhao Y
Cell Res (2024) 34 pp. 586-589 [ DOI: doi:10.1038/s41422-024-00974-9 Pubmed: 38777861 ]
- Transporterb (Complex from Homo sapiens)
- Noradrenaline (170 Da, Ligand)
- Synaptic vesicular amine transporter (49 kDa, Protein from Homo sapiens)
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8jt5
Q-score: 0.521
Wu D, Yu Z, Chen Q, Zhao J, Huang B, Wang Y, Su J, Li N, Jiang D, Zhao Y
Cell Res (2024) 34 pp. 586-589 [ DOI: doi:10.1038/s41422-024-00974-9 Pubmed: 38777861 ]
- Histamine (111 Da, Ligand)
- Transporterc (Complex from Homo sapiens)
- Synaptic vesicular amine transporter (49 kDa, Protein from Homo sapiens)
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8jtb
Q-score: 0.573
Wu D, Yu Z, Chen Q, Zhao J, Huang B, Wang Y, Su J, Li N, Jiang D, Zhao Y
Cell Res (2024) 34 pp. 586-589 [ DOI: doi:10.1038/s41422-024-00974-9 Pubmed: 38777861 ]
- Transporterc (Complex from Homo sapiens)
- L-dopamine (153 Da, Ligand)
- Synaptic vesicular amine transporter (49 kDa, Protein from Homo sapiens)
Cryo-EM Structure of Human Ninjurin1 curved oligomer
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8uip
Q-score: 0.046
David L, Borges JP, Hollingsworth LR, Volchuk A, Jansen I, Garlick E, Steinberg BE, Wu H
Cell (2024) 187 pp. 2224-2235.e16 [ Pubmed: 38614101 DOI: doi:10.1016/j.cell.2024.03.008 ]
- Ninjurin-1 (16 kDa, Protein from Homo sapiens)
- Ninjurin 1 ring oligomer (Complex from Homo sapiens)