Guillardia theta Fanzor (GtFz) State 1
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 9cer
Q-score: 0.197
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Maltose/maltodextrin-binding periplasmic protein,guillardia theta fanzor1 (124 kDa, Protein from Guillardia theta)
- Gtfz-omegarna complex (Complex from Guillardia theta)
- Rna (142-mer) (49 kDa, RNA from Guillardia theta)
- Zinc ion (65 Da, Ligand)
Guillardia theta Fanzor (GtFz) State 2
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9ces
Q-score: 0.329
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Maltose/maltodextrin-binding periplasmic protein,guillardia theta fanzor1 (124 kDa, Protein from Guillardia theta)
- Rna (142-mer) (49 kDa, RNA from Guillardia theta)
- Dna (5'-d(p*cp*cp*cp*gp*gp*gp*gp*cp*cp*tp*tp*tp*ap*ap*g)-3') (5 kDa, DNA from synthetic construct)
- Zinc ion (65 Da, Ligand)
- Guillardia theta fanzor1-omegarna-target dna complex (Complex from Guillardia theta)
- Dna (5'-d(p*ap*tp*gp*ap*cp*tp*tp*cp*tp*cp*tp*tp*ap*ap*ap*gp*gp*cp*cp*cp*cp*gp*gp*g)-3') (14 kDa, DNA from synthetic construct)
Guillardia theta Fanzor (GtFz) State 3
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9cet
Q-score: 0.348
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Dna (5'-d(p*ap*tp*gp*ap*cp*tp*tp*cp*tp*cp*tp*tp*ap*ap*ap*gp*gp*cp*cp*cp*cp*gp*gp*g)-3') (25 kDa, DNA from synthetic construct)
- Dna (28-mer) (24 kDa, DNA from synthetic construct)
- Maltose/maltodextrin-binding periplasmic protein,guillardia theta fanzor1 (124 kDa, Protein from Guillardia theta)
- Zinc ion (65 Da, Ligand)
- Guillardia theta fanzor1-omegarna-target dna complex (Complex from Guillardia theta)
- Rna (142-mer) (49 kDa, RNA from Guillardia theta)
Cryo-EM structure of the channelrhodopsin GtCCR2 focused on the monomer
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 8yej
Q-score: 0.57
Tanaka T, Hososhima S, Yamashita Y, Sugimoto T, Nakamura T, Shigemura S, Iida W, Sano FK, Oda K, Uchihashi T, Katayama K, Furutani Y, Tsunoda SP, Shihoya W, Kandori H, Nureki O
Mol Cell (2024) 84 pp. 3530-3544.e6 [ Pubmed: 39232582 DOI: doi:10.1016/j.molcel.2024.08.016 ]
- Water (18 Da, Ligand)
- Gtccr2 (52 kDa, Protein from Guillardia theta CCMP2712)
- Retinal (284 Da, Ligand)
- Gtccr2 (Complex from Guillardia theta)
Cryo-EM structure of the channelrhodopsin GtCCR2
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 8yek
Q-score: 0.564
Tanaka T, Hososhima S, Yamashita Y, Sugimoto T, Nakamura T, Shigemura S, Iida W, Sano FK, Oda K, Uchihashi T, Katayama K, Furutani Y, Tsunoda SP, Shihoya W, Kandori H, Nureki O
Mol Cell (2024) 84 pp. 3530-3544.e6 [ Pubmed: 39232582 DOI: doi:10.1016/j.molcel.2024.08.016 ]
- Water (18 Da, Ligand)
- Retinal (284 Da, Ligand)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Gtccr2 (52 kDa, Protein from Guillardia theta CCMP2712)
- Gtccr2 (Complex from Guillardia theta)
Cryo-EM structure of the channelrhodopsin GtCCR4
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 8yel
Q-score: 0.602
Tanaka T, Hososhima S, Yamashita Y, Sugimoto T, Nakamura T, Shigemura S, Iida W, Sano FK, Oda K, Uchihashi T, Katayama K, Furutani Y, Tsunoda SP, Shihoya W, Kandori H, Nureki O
Mol Cell (2024) 84 pp. 3530-3544.e6 [ Pubmed: 39232582 DOI: doi:10.1016/j.molcel.2024.08.016 ]
- Water (18 Da, Ligand)
- Retinal (284 Da, Ligand)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Cation channel rhodopsin 4 (45 kDa, Protein from Guillardia theta)
- Gtccr4 (Complex from Guillardia theta)