S-RBD(Omicron BA.3) in complex with PD of ACE2
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8i9e
Q-score: 0.549
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]
- Processed angiotensin-converting enzyme 2 (71 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S-rbd (omicron ba.3) (Complex from Homo sapiens)
- Pd of ace2 (Complex)
- S-rbd (omicron ba.3) in complex with pd of ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (25 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
S-ECD (Omicron BA.3) in complex with two PD of ACE2
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7y20
Q-score: 0.205
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]
- Processed angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S-ecd (omicron ba.3) (Complex from Homo sapiens)
- Pd of ace2 (Complex)
- S-ecd (omicron ba.3) in complex with 2 pd of ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
S-ECD (Omicron BA.5) in complex with PD of ACE2
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7y21
Q-score: 0.209
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S-ecd (omicron ba.5) in complex with pd of ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S-ecd (omicron ba.5) (Complex from Homo sapiens)
- Pd of ace2 (Complex)
S-ECD (Omicron BA.2) in complex with PD of ACE2
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7y1y
Q-score: 0.184
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S-ecd (omicron ba.2) in complex with pd of ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Pd of ace2 (Complex)
- S-ecd (omicron ba.2) (Complex from Homo sapiens)
S-ECD (Omicron BA.3) in complex with three PD of ACE2
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7y1z
Q-score: 0.178
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]
- Processed angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S-ecd (omicron ba.3) (Complex from Homo sapiens)
- Pd of ace2 (Complex)
- S-ecd (omicron ba.3) in complex with 3 pd of ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
map focused on the interface between BA.2 RBD and ACE2
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]
map focused on the interface between BA.3 RBD and ACE2
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]
map focused on the interface between BA.4 RBD and ACE2
Viruses (2023) 15 [ DOI: doi:10.3390/v15061398 Pubmed: 37376697 ]