The asymmetric unit of P22 empty capsid
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8i1t
Q-score: 0.62
Xiao H, Zhou J, Yang F, Liu Z, Song J, Chen W, Liu H, Cheng L
Viruses (2023) 15 [ Pubmed: 36851569 DOI: doi:10.3390/v15020355 ]
- Salmonella phage p22 (Virus from Salmonella phage P22)
- Major capsid protein (46 kDa, Protein from Salmonella phage P22)
The asymmetric unit of P22 procapsid
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8i1v
Q-score: 0.542
Xiao H, Zhou J, Yang F, Liu Z, Song J, Chen W, Liu H, Cheng L
Viruses (2023) 15 [ Pubmed: 36851569 DOI: doi:10.3390/v15020355 ]
- Scaffolding protein (33 kDa, Protein from Salmonella phage P22)
- Salmonella phage p22 (Virus from Salmonella phage P22)
- Major capsid protein (46 kDa, Protein from Salmonella phage P22)
Echovirus3 A-particle in complex with 6D10 Fab
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8gsc
Q-score: 0.47
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ DOI: doi:10.3390/v14112322 Pubmed: 36366420 ]
- Echovirus e3 (Virus from Echovirus E3)
- Vp2 (27 kDa, Protein from Echovirus E3)
- 6d10 fab (Complex from Mus musculus)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp3 (25 kDa, Protein from Echovirus E3)
- Echovirus3 a-particle in complex with 6d10 fab (Complex)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp1 (26 kDa, Protein from Echovirus E3)
Echovirus3 full particle in complex with 6D10 Fab
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8gsd
Q-score: 0.556
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ DOI: doi:10.3390/v14112322 Pubmed: 36366420 ]
- Echovirus e3 (Virus from Echovirus E3)
- Echovirus3 full particle in complex with 6d10 fab (Complex)
- 6d10 fab (Complex from Mus musculus)
- Genome polyprotein (29 kDa, Protein from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Genome polyprotein (fragment) (32 kDa, Protein from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Genome polyprotein (fragment) (7 kDa, Protein from Echovirus E3)
- Genome polyprotein (26 kDa, Protein from Echovirus E3)
Echovirus3 empty particle in complex with 6D10 Fab (upright)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8gse
Q-score: 0.448
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ DOI: doi:10.3390/v14112322 Pubmed: 36366420 ]
- Echovirus e3 (Virus from Echovirus E3)
- 6d10 fab (Complex from Mus musculus)
- Vp0 (28 kDa, Protein from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Echovirus3 empty particle in complex with 6d10 fab (upright) (Complex)
- Vp3 (25 kDa, Protein from Echovirus E3)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp1 (26 kDa, Protein from Echovirus E3)
Echovirus3 empty particle in complex with 6D10 Fab (sideling)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8gsf
Q-score: 0.445
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ DOI: doi:10.3390/v14112322 Pubmed: 36366420 ]
- Echovirus3 empty particle in complex with 6d10 fab (sideling) (Complex)
- Echovirus e3 (Virus from Echovirus E3)
- 6d10 fab (Complex from Mus musculus)
- Vp0 (28 kDa, Protein from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp3 (25 kDa, Protein from Echovirus E3)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp1 (26 kDa, Protein from Echovirus E3)
Capsid structure of Ralstonia phage GP4
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8h89
Q-score: 0.502
Zheng J, Chen W, Xiao H, Yang F, Li X, Song J, Cheng L, Liu H
Viruses (2022) 14 [ DOI: doi:10.3390/v14112431 Pubmed: 36366529 ]
- Ralstonia phage gp4 (Virus from Ralstonia phage GP4)
- Virion associated protein (15 kDa, Protein from Ralstonia phage GP4)
- Major capsid protein (40 kDa, Protein from Ralstonia phage GP4)