RNA priming complex of Human polymerase alpha-primase (Conformation 2)
Cordoba JJ, Mullins EA, Salay LE, Eichman BF, Chazin WJ
J Mol Biol (2023) 435 pp. 168330-168330 [ Pubmed: 37884206 DOI: doi:10.1016/j.jmb.2023.168330 ]
- Dna primase large subunit (Protein from Homo sapiens)
- Ternary complex of polymerase alpha-primase bound to an rna primed-template substrate. (200 kDa, Complex from Homo sapiens)
- Dna polymerase alpha subunit b (Protein from Homo sapiens)
- Rna priming substrate - template (DNA from Homo sapiens)
- Dna polymerase alpha catalytic subunit (Protein from Homo sapiens)
- Rna priming substrate - primer (RNA from Homo sapiens)
- Dna primase small subunit (Protein from Homo sapiens)
RNA priming complex of Human Polymerase-Alpha-Primase (Conformation 1)
Cordoba JJ, Mullins EA, Salay LE, Eichman BF, Chazin WJ
J Mol Biol (2023) 435 pp. 168330-168330 [ Pubmed: 37884206 DOI: doi:10.1016/j.jmb.2023.168330 ]
- Dna primase large subunit (Protein from Homo sapiens)
- Ternary complex of polymerase alpha-primase bound to an rna primed-template substrate. (200 kDa, Complex from Homo sapiens)
- Dna polymerase alpha subunit b (Protein from Homo sapiens)
- Rna priming substrate - template (DNA from Homo sapiens)
- Dna polymerase alpha catalytic subunit (Protein from Homo sapiens)
- Rna priming substrate - primer (RNA from Homo sapiens)
- Dna primase small subunit (Protein from Homo sapiens)
RNA priming complex of Human Polymerase alpha-primase (Conformation 3)
Cordoba JJ, Mullins EA, Salay LE, Eichman BF, Chazin WJ
J Mol Biol (2023) 435 pp. 168330-168330 [ Pubmed: 37884206 DOI: doi:10.1016/j.jmb.2023.168330 ]
- Dna primase large subunit (Protein from Homo sapiens)
- Ternary complex of polymerase alpha-primase bound to an rna primed-template substrate. (200 kDa, Complex from Homo sapiens)
- Dna polymerase alpha subunit b (Protein from Homo sapiens)
- Rna priming substrate - template (DNA from Homo sapiens)
- Dna polymerase alpha catalytic subunit (Protein from Homo sapiens)
- Rna priming substrate - primer (RNA from Homo sapiens)
- Dna primase small subunit (Protein from Homo sapiens)
Cryo-EM structure of CENP-A nucleosome complexed with CENP-LN
Tian T, Li X, Liu Y, Wang C, Liu X, Bi G, Zhang X, Yao X, Zhou ZH, Zang J
Cell Res (2018) 28 pp. 374-378 [ DOI: doi:10.1038/cr.2018.13 Pubmed: 29350209 ]
- Histone h4 (Protein from Homo sapiens)
- Centromere protein l (cenp-l) (Protein from Homo sapiens)
- Dna (147-mer) (DNA from Homo sapiens)
- Cenp-a ncp (Complex)
- Histone h2a (Protein from Homo sapiens)
- Centromere protein n (cenp-n) (Protein from Homo sapiens)
- Histone h2b (Protein from Homo sapiens)
- Histone h3-like centromeric protein a (cenp-a) (Protein from Homo sapiens)
- Cenp-nl complex (Complex)
- Cenp-a ncp/cenp-ln complex (Complex from Homo sapiens)
CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference
Hochstrasser ML, Taylor DW, Bhat P, Guegler CK, Sternberg SH, Nogales E, Doudna JA
PNAS (2014) 111 pp. 6618-6623 [ DOI: doi:10.1073/pnas.1405079111 Pubmed: 24748111 ]
- Crispr system cascade subunit casb (18 kDa, Protein from Escherichia coli K-12)
- Cascade bound to a 72 bp target dsdna (443 kDa, Sample)
- Crispr system cascade subunit casa (55 kDa, Protein from Escherichia coli K-12)
- R44 crispr rna (18 kDa, RNA from Escherichia coli K-12)
- Crispr system cascade subunit casc (40 kDa, Protein from Escherichia coli K-12)
- Crispr system cascade subunit casd (25 kDa, Protein from Escherichia coli K-12)
- Crispr system cascade subunit case (22 kDa, Protein from Escherichia coli K-12)
- 72 bp dsdna target with r44 protospacer (44 kDa, DNA from Enterobacteria phage P7)
CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference
Hochstrasser ML, Taylor DW, Bhat P, Guegler CK, Sternberg SH, Nogales E, Doudna JA
PNAS (2014) 111 pp. 6618-6623 [ DOI: doi:10.1073/pnas.1405079111 Pubmed: 24748111 ]
- Crispr system cascade subunit casb (18 kDa, Protein from Escherichia coli K-12)
- Crispr system cascade subunit casa (55 kDa, Protein from Escherichia coli K-12)
- R44 crispr rna (18 kDa, RNA from Escherichia coli K-12)
- Cas3 bound to dsdna-cascade (543 kDa, Sample)
- Crispr-associated endonuclease/helicase cas3 (100 kDa, Protein from Escherichia coli K-12)
- Crispr system cascade subunit casc (40 kDa, Protein from Escherichia coli K-12)
- Crispr system cascade subunit casd (25 kDa, Protein from Escherichia coli K-12)
- Crispr system cascade subunit case (22 kDa, Protein from Escherichia coli K-12)
- 72 bp dsdna target with r44 protospacer (44 kDa, DNA from Enterobacteria phage P7)
Structures of Cas9 endonucleases reveal RNA-mediated conformational activation
Jinek M, Jiang F, Taylor DW, Sternberg SH, Kaya E, Ma E, Anders C, Hauer M, Zhou K, Lin S, Kaplan M, Iavarone AT, Charpentier E, Nogales E, Doudna JA
Science (2014) 343 pp. 1247997- [ DOI: doi:10.1126/science.1247997 Pubmed: 24505130 ]
- Crispr-associated endonuclease cas9 (159 kDa, Protein from Streptococcus pyogenes)
- Crispr rna (14 kDa, RNA from Streptococcus pyogenes)
- 55 bp dna duplex non-target strand (17 kDa, DNA from Enterobacteria phage lambda)
- Cas9 loaded with crrna:tracrrna and bound to target dna duplex (230 kDa, Sample)
- 55 bp dna duplex target strand (17 kDa, DNA from Enterobacteria phage lambda)
- Trans-activating crispr rna (24 kDa, RNA from Streptococcus pyogenes)
Querol-Audi J, Yan C, Xu X, Tsutakawa SE, Tsai MS, Tainer JA, Cooper PK, Nogales E, Ivanov I
PNAS (2012) 109 pp. 8528-8533 [ DOI: doi:10.1073/pnas.1121116109 Pubmed: 22586102 ]
- Flap endonuclease 1 (42 kDa, Protein from Homo sapiens)
- Human fen1/911/dna ternary complex (140 kDa, Sample)
- Human checkpoint clamp (100 kDa, Protein from Homo sapiens)
- Dna (DNA from synthetic construct)