Electron Microscopy Data Bank

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Negative-stain EM reconstruction of SpFN_1B-06-PL, a SARS-CoV-2 spike fused to H.pylori ferritin nanoparticle vaccine candidate

Release date: Dec. 22, 2021
Resolution: 30.0 Å
EM Method: Single-particle

Joyce MG, Chen WH, Sankhala RS, Hajduczki A, Thomas PV, Choe M, Chang W, Peterson CE, Martinez E, Morrison EB, Smith C, Ahmed A, Wieczorek L, Anderson A, Chen RE, Case JB, Li Y, Oertel T, Rosado L, Ganesh A, Whalen C, Carmen JM, Mendez-Rivera L, Karch C, Gohain N, Villar Z, McCurdy D, Beck Z, Kim J, Shrivastava S, Jobe O, Dussupt V, Molnar S, Tran U, Kannadka CB, Zemil M, Khanh H, Wu W, Cole MA, Duso DK, Kummer LW, Lang TJ, Muncil SE, Currier JR, Krebs SJ, Polonis VR, Rajan S, McTamney PM, Esser MT, Reiley WW, Rolland M, de Val N, Diamond MS, Gromowski GD, Matyas GR, Rao M, Michael NL, Modjarrad K

Cell Rep (2021) [ DOI: doi:10.1101/2021.05.09.443331 Pubmed: 34013273 ]

Sample:

Spfn_1b-06-pl, a ferritin-based nanoparticle vaccine candidate displaying trimeric sars-cov-2 spike ectodomain (3 MDa, Complex from Severe acute respiratory syndrome coronavirus 2)

EMD-25449

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RFN_131, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Receptor-Binding Domain

Release date: Dec. 22, 2021
Resolution: 30.0 Å
EM Method: Single-particle

Joyce MG, Chen WH, Sankhala RS, Hajduczki A, Thomas PV, Choe M, Chang W, Peterson CE, Martinez E, Morrison EB, Smith C, Ahmed A, Wieczorek L, Anderson A, Chen RE, Case JB, Li Y, Oertel T, Rosado L, Ganesh A, Whalen C, Carmen JM, Mendez-Rivera L, Karch C, Gohain N, Villar Z, McCurdy D, Beck Z, Kim J, Shrivastava S, Jobe O, Dussupt V, Molnar S, Tran U, Kannadka CB, Zemil M, Khanh H, Wu W, Cole MA, Duso DK, Kummer LW, Lang TJ, Muncil SE, Currier JR, Krebs SJ, Polonis VR, Rajan S, McTamney PM, Esser MT, Reiley WW, Rolland M, de Val N, Diamond MS, Gromowski GD, Matyas GR, Rao M, Michael NL, Modjarrad K

Cell Rep (2021) [ DOI: doi:10.1101/2021.05.09.443331 Pubmed: 34013273 ]

Sample:

Rfn_131, a ferritin-based nanoparticle vaccine candidate displaying the sars-cov-2 receptor-binding domain (1 MDa, Complex from Severe acute respiratory syndrome coronavirus 2)

EMD-25450

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pCoV146, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike Receptor-Binding and N-Terminal Domains

Release date: Dec. 22, 2021
Resolution: 40.0 Å
EM Method: Single-particle

Joyce MG, Chen WH, Sankhala RS, Hajduczki A, Thomas PV, Choe M, Chang W, Peterson CE, Martinez E, Morrison EB, Smith C, Ahmed A, Wieczorek L, Anderson A, Chen RE, Case JB, Li Y, Oertel T, Rosado L, Ganesh A, Whalen C, Carmen JM, Mendez-Rivera L, Karch C, Gohain N, Villar Z, McCurdy D, Beck Z, Kim J, Shrivastava S, Jobe O, Dussupt V, Molnar S, Tran U, Kannadka CB, Zemil M, Khanh H, Wu W, Cole MA, Duso DK, Kummer LW, Lang TJ, Muncil SE, Currier JR, Krebs SJ, Polonis VR, Rajan S, McTamney PM, Esser MT, Reiley WW, Rolland M, de Val N, Diamond MS, Gromowski GD, Matyas GR, Rao M, Michael NL, Modjarrad K

Cell Rep (2021) [ DOI: doi:10.1101/2021.05.09.443331 Pubmed: 34013273 ]

Sample:

Pcov146, a ferritin-based nanoparticle vaccine candidate displaying the sars-cov-2 spike receptor-binding and n-terminal domains (1 MDa, Complex from Severe acute respiratory syndrome coronavirus 2)

EMD-25451

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pCoV111, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike S1 Subunit

Release date: Dec. 22, 2021
Resolution: 30.0 Å
EM Method: Single-particle

Joyce MG, Chen WH, Sankhala RS, Hajduczki A, Thomas PV, Choe M, Chang W, Peterson CE, Martinez E, Morrison EB, Smith C, Ahmed A, Wieczorek L, Anderson A, Chen RE, Case JB, Li Y, Oertel T, Rosado L, Ganesh A, Whalen C, Carmen JM, Mendez-Rivera L, Karch C, Gohain N, Villar Z, McCurdy D, Beck Z, Kim J, Shrivastava S, Jobe O, Dussupt V, Molnar S, Tran U, Kannadka CB, Zemil M, Khanh H, Wu W, Cole MA, Duso DK, Kummer LW, Lang TJ, Muncil SE, Currier JR, Krebs SJ, Polonis VR, Rajan S, McTamney PM, Esser MT, Reiley WW, Rolland M, de Val N, Diamond MS, Gromowski GD, Matyas GR, Rao M, Michael NL, Modjarrad K

Cell Rep (2021) [ DOI: doi:10.1101/2021.05.09.443331 Pubmed: 34013273 ]

Sample:

Pcov111, a ferritin-based nanoparticle vaccine candidate displaying the sars-cov-2 spike s1 subunit (2 MDa, Complex from Severe acute respiratory syndrome coronavirus 2)

EMD-2802

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Negative stain electron microscopy reconstruction of the tip complex from the type III secretion system of Shigella flexneri lacking IpaB

Release date: Dec. 3, 2014
Resolution: 23.0 Å
EM Method: Single-particle

Cheung M, Shen DK, Makino F, Kato T, Roehrich AD, Martinez-Argudo I, Walker ML, Murillo I, Liu X, Pain M, Brown J, Frazer G, Mantell J, Mina P, Todd T, Sessions RB, Namba K, Blocker AJ

Mol Microbiol (2015) 95 pp. 31-50 [ DOI: doi:10.1111/mmi.12843 Pubmed: 25353930 ]

Sample:

Conformation of the tip complex from the type iii secretion system of shigella flexneri lacking ipab, bound to the needle (680 kDa, Sample)
Needle (470 kDa, Cellular component from Shigella flexneri)
Tip complex (210 kDa, Cellular component from Shigella flexneri)

EMD-2805

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Refined negative stain electron microscopy reconstruction of the tip complex from the type III secretion system of Shigella flexneri with MxiH mutation Q51A

Release date: Dec. 3, 2014
Resolution: 19.0 Å
EM Method: Single-particle

Cheung M, Shen DK, Makino F, Kato T, Roehrich AD, Martinez-Argudo I, Walker ML, Murillo I, Liu X, Pain M, Brown J, Frazer G, Mantell J, Mina P, Todd T, Sessions RB, Namba K, Blocker AJ

Mol Microbiol (2015) 95 pp. 31-50 [ DOI: doi:10.1111/mmi.12843 Pubmed: 25353930 ]

Sample:

Conformation of the tip complex from the type iii secretion system of shigella flexneri bound to the needle with mxih mutation q51a (680 kDa, Sample)
Tip complex and needle (470 kDa, Cellular component from Shigella flexneri)
Tip complex and needle (210 kDa, Cellular component from Shigella flexneri)

EMD-2806

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Negative stain electron microscopy reconstruction of the tip complex from the type III secretion system of Shigella flexneri with MxiH mutations P44A+Q51A

Release date: Dec. 3, 2014
Resolution: 24.0 Å
EM Method: Single-particle

Cheung M, Shen DK, Makino F, Kato T, Roehrich AD, Martinez-Argudo I, Walker ML, Murillo I, Liu X, Pain M, Brown J, Frazer G, Mantell J, Mina P, Todd T, Sessions RB, Namba K, Blocker AJ

Mol Microbiol (2015) 95 pp. 31-50 [ DOI: doi:10.1111/mmi.12843 Pubmed: 25353930 ]

Sample:

Conformation of the tip complex from the type iii secretion system of shigella flexneri bound to the needle with mxih mutations p44a+q51a (680 kDa, Sample)
Needle (470 kDa, Cellular component from Shigella flexneri)
Tip complex (210 kDa, Cellular component from Shigella flexneri)

EMD-2804

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Negative stain electron microscopy reconstruction of the tip complex from the type III secretion system of Shigella flexneri with MxiH mutation Q51A

Release date: Nov. 5, 2014
Resolution: 21.0 Å
EM Method: Single-particle

Cheung M, Shen DK, Makino F, Kato T, Roehrich AD, Martinez-Argudo I, Walker ML, Murillo I, Liu X, Pain M, Brown J, Frazer G, Mantell J, Mina P, Todd T, Sessions RB, Namba K, Blocker AJ

Mol Microbiol (2015) 95 pp. 31-50 [ DOI: doi:10.1111/mmi.12843 Pubmed: 25353930 ]

Sample:

Conformation of the tip complex from the type iii secretion system of shigella flexneri bound to the needle with mxih mutation q51a (680 kDa, Sample)
Needle (470 kDa, Cellular component from Shigella flexneri)
Tip complex (210 kDa, Cellular component from Shigella flexneri)

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