Electron Microscopy Data Bank

EMD-5767

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Electron cryo-microscopy of a chemical cross-linked K87C/S199C Mm-cpn with ABDM

Release date: Dec. 4, 2013
Resolution: 15.6 Å
EM Method: Single-particle

Hoersch D, Roh SH, Chiu W, Kortemme T

Nat Nanotechnol (2013) 8 pp. 928-932 [ DOI: doi:10.1038/nnano.2013.242 Pubmed: 24270642 ]

Sample:

Mutant methanococcus maripaludis chaperonin (1 MDa, Protein from Methanococcus maripaludis)
Apo k87c/s199c mutant mm-cpn (1 MDa, Sample)

EMD-5768

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Electron cryo-microscopy of a mutant K87C/S199C Mm-cpn (ATP-AlFx)

Release date: Dec. 4, 2013
Resolution: 18.9 Å
EM Method: Single-particle

Hoersch D, Roh SH, Chiu W, Kortemme T

Nat Nanotechnol (2013) 8 pp. 928-932 [ DOI: doi:10.1038/nnano.2013.242 Pubmed: 24270642 ]

Sample:

Apo k87c/s199c mutant mm-cpn (atp-alfx) (1 MDa, Sample)
Mutant methanococcus maripaludis chaperonin (1 MDa, Protein from Methanococcus maripaludis)

EMD-5769

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Electron cryo-microscopy of a chemical cross-linked K87C/S199C Mm-cpn with ABDM (unlighted, ATP-AlFx)

Release date: Dec. 4, 2013
Resolution: 17.4 Å
EM Method: Single-particle

Hoersch D, Roh SH, Chiu W, Kortemme T

Nat Nanotechnol (2013) 8 pp. 928-932 [ DOI: doi:10.1038/nnano.2013.242 Pubmed: 24270642 ]

Sample:

Mutant methanococcus maripaludis chaperonin (1 MDa, Protein from Methanococcus maripaludis)
Chemically cross-linked k87c/s199c mm-cpn with abdm (unlighted, atp-alfx) (1 MDa, Sample)

EMD-5770

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Electron cryo-microscopy of a chemical cross-linked K87C/S199C Mm-cpn with ABDM (illuminated, ATP-AlFx)

Release date: Dec. 4, 2013
Resolution: 16.6 Å
EM Method: Single-particle

Hoersch D, Roh SH, Chiu W, Kortemme T

Nat Nanotechnol (2013) 8 pp. 928-932 [ DOI: doi:10.1038/nnano.2013.242 Pubmed: 24270642 ]

Sample:

Mutant methanococcus maripaludis chaperonin (1 MDa, Protein from Methanococcus maripaludis)
Chemically cross-linked k87c/s199c mm-cpn with abdm (illuminated, atp-alfx) (1 MDa, Sample)

EMD-5375

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Direct electron detection yields cryo-EM reconstructions at resolutions beyond .75 Nyquist frequency

Release date: Oct. 24, 2012
Resolution: 8.5 Å
EM Method: Single-particle

Bammes BE, Rochat RH, Jakana J, Chen DH, Chiu W

J Struct Biol (2012) 177 pp. 589-601 [ DOI: doi:10.1016/j.jsb.2012.01.008 Pubmed: 22285189 ]

Sample:

EMD-5263

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Quaternary structures of HIV Env immunogen exhibit conformational vicissitudes and interface diminution elicited by ligand binding

Release date: March 5, 2012
Resolution: 19.0 Å
EM Method: Single-particle

Moscoso CG, Sun Y, Poon S, Xing L, Kan E, Martin L, Green D, Lin F, Vahlne AG, Barnett S, Srivastava I, Cheng RH

PNAS (2011) 108 pp. 6091-6096 [ DOI: doi:10.1073/pnas.1016113108 Pubmed: 21444771 ]

Sample:

O-gp140dv2tv1 (450 kDa, Protein from Human immunodeficiency virus 1)
O-gp140dv2tv1 trimer (450 kDa, Sample)

EMD-5264

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Quaternary structures of HIV Env immunogen exhibit conformational vicissitudes and interface diminution elicited by ligand binding

Release date: March 5, 2012
Resolution: 13.0 Å
EM Method: Single-particle

Moscoso CG, Sun Y, Poon S, Xing L, Kan E, Martin L, Green D, Lin F, Vahlne AG, Barnett S, Srivastava I, Cheng RH

PNAS (2011) 108 pp. 6091-6096 [ DOI: doi:10.1073/pnas.1016113108 Pubmed: 21444771 ]

Sample:

O-gp140dv2tv1 (450 kDa, Protein from Human immunodeficiency virus 1)
O-gp140dv2tv1 trimer bound to cd4m (450 kDa, Sample)

EMD-1676

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CryoEM 3D reconstruction of Rhodobacter capsulatus Mg-chelatase BchID complex in the presence of ADP

Release date: Jan. 21, 2010
Resolution: 7.5 Å
EM Method: Single-particle
Fitted PDBs: 2x31
Q-score: -0.003

Lundqvist J, Elmlund H, Wulff RP, Berglund L, Elmlund D, Emanuelsson C, Hebert H, Willows RD, Hansson M, Lindahl M, Al-Karadaghi S

Structure (2010) 18 pp. 354-365 [ Pubmed: 20223218 DOI: doi:10.1016/j.str.2010.01.001 ]

Sample:

Biosynthetic enzyme (660 kDa, Protein from Rhodobacter capsulatus)
Complex of mg-chelatase subunits bchi and bchd in presence of adp (660 kDa, Sample)

EMD-1677

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CryoEM 3D reconstruction of Rhodobacter capsulatus Mg-chelatase BchID complex in the presence of ATP

Release date: Jan. 21, 2010
Resolution: 13.0 Å
EM Method: Single-particle
Fitted PDBs: 2x31
Q-score: -0.001

Lundqvist J, Elmlund H, Wulff RP, Berglund L, Elmlund D, Emanuelsson C, Hebert H, Willows RD, Hansson M, Lindahl M, Al-Karadaghi S

Structure (2010) 18 pp. 354-365 [ Pubmed: 20223218 DOI: doi:10.1016/j.str.2010.01.001 ]

Sample:

Biosynthetic enzyme (660 kDa, Protein from Rhodobacter capsulatus)
Complex of mg-chelatase subunits bchi and bchd in presence of atp (660 kDa, Sample)

EMD-1678

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CryoEM 3D reconstruction of Rhodobacter capsulatus Mg-chelatase BchID complex in the presence of AMPPNP

Release date: Jan. 21, 2010
Resolution: 14.0 Å
EM Method: Single-particle
Fitted PDBs: 2x31
Q-score: -0.003

Lundqvist J, Elmlund H, Wulff RP, Berglund L, Elmlund D, Emanuelsson C, Hebert H, Willows RD, Hansson M, Lindahl M, Al-Karadaghi S

Structure (2010) 18 pp. 354-365 [ Pubmed: 20223218 DOI: doi:10.1016/j.str.2010.01.001 ]

Sample:

Complex of mg-chelatase subunits bchi and bchd in presence of amppnp (660 kDa, Sample)
Biosynthetic enzyme (660 kDa, Protein from Rhodobacter capsulatus)

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