Electron Microscopy Data Bank

EMD-5640

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cryo-EM structure of CCT5 complex with 1mM ATP/AlFx (C8 symmetry)

Release date: May 22, 2013
Resolution: 22.0 Å
EM Method: Single-particle

Sergeeva OA, Chen B, Haase-Pettingell C, Ludtke SJ, Chiu W, King JA

J Biol Chem (2013) 288 pp. 17734-17744 [ DOI: doi:10.1074/jbc.M112.443929 Pubmed: 23612981 ]

Sample:

Cct5 complex (1 MDa, Sample)
Chaperonin containing tcp1, subunit 5 (epsilon) (1 MDa, Protein from Homo sapiens)

EMD-5641

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cryo-EM structure of CCT5 complex with 1mM ATP/AlFx (symmetry-free)

Release date: May 22, 2013
EM Method: Single-particle

Sergeeva OA, Chen B, Haase-Pettingell C, Ludtke SJ, Chiu W, King JA

J Biol Chem (2013) 288 pp. 17734-17744 [ DOI: doi:10.1074/jbc.M112.443929 Pubmed: 23612981 ]

Sample:

Cct5 complex (1 MDa, Sample)
Chaperonin containing tcp1, subunit 5 (epsilon) (1 MDa, Protein from Homo sapiens)

EMD-5278

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3D structure of a full-length type 1 inositol 1,4,5-trisphosphate receptor in the closed state

Release date: Aug. 9, 2011
Resolution: 9.5 Å
EM Method: Single-particle

Ludtke SJ, Tran TP, Ngo QT, Moiseenkova-Bell VY, Chiu W, Serysheva II

Structure (2011) 19 pp. 1192-1199 [ Pubmed: 21827954 DOI: doi:10.1016/j.str.2011.05.003 ]

Sample:

Type 1 inositol 1,4,5-trisphosphate receptor (1 MDa, Sample)
Ion channel (1 MDa, Protein from Rattus norvegicus)

EMD-5244

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Mm-cpn D386A with ATP

Release date: Jan. 24, 2011
Resolution: 11.0 Å
EM Method: Single-particle
Fitted PDBs: 3izh
Q-score: 0.034

Douglas NR, Reissmann S, Zhang J, Chen B, Jakana J, Kumar R, Chiu W, Frydman J

Cell (2011) 144 pp. 240-252 [ DOI: doi:10.1016/j.cell.2010.12.017 Pubmed: 21241893 ]

Sample:

Chaperonin (900 kDa, Protein from Methanococcus maripaludis)
Mm-cpn d386a with atp (900 kDa, Sample)

EMD-5052

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cryoEM structure of Abeta(1-42) amyloid fibrils

Release date: July 7, 2010
Resolution: 10.0 Å
EM Method: Helical reconstruction

Zhang R, Hu X, Khant H, Ludtke SJ, Chiu W, Schmid MF, Frieden C, Lee JM

PNAS (2009) 106 pp. 4653-4658 [ DOI: doi:10.1073/pnas.0901085106 Pubmed: 19264960 ]

Sample:

Abeta(1-42) amyloid fibril (Sample)
Abeta(1-42) amyloid fibril (5 kDa, Protein)

EMD-5139

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Wildtype Mm-cpn in the open state

Release date: Feb. 4, 2010
Resolution: 10.0 Å
EM Method: Single-particle

Zhang J, Baker ML, Schroeder G, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W

Nature (2010) 463 pp. 379-383 [ Pubmed: 20090755 DOI: doi:10.1038/nature08701 ]

Sample:

Mm-cpn (960 kDa, Sample)
Methanococcus maripaludis chaperonin (960 kDa, Protein from Methanococcus maripaludis)

EMD-1305

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Electron cryotomography reveals the portal in the herpesvirus capsid.

Release date: Dec. 6, 2007
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Rixon FJ, Chiu W

J Virol (2007) 81 pp. 2065-2068 [ DOI: doi:10.1128/JVI.02053-06 Pubmed: 17151101 ]

Sample:

Herpes simplex virus 1 (Sample)
Human herpesvirus 1 (Virus from Human herpesvirus 1)

EMD-1306

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Electron cryotomography reveals the portal in the herpesvirus capsid.

Release date: Dec. 6, 2007
Resolution: 57.0 Å
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Rixon FJ, Chiu W

J Virol (2007) 81 pp. 2065-2068 [ DOI: doi:10.1128/JVI.02053-06 Pubmed: 17151101 ]

Sample:

Herpes simplex virus 1 (Sample)
Human herpesvirus 1 (Virus from Human herpesvirus 1)

EMD-1307

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Electron cryotomography reveals the portal in the herpesvirus capsid.

Release date: Dec. 6, 2007
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Rixon FJ, Chiu W

J Virol (2007) 81 pp. 2065-2068 [ DOI: doi:10.1128/JVI.02053-06 Pubmed: 17151101 ]

Sample:

Herpes simplex virus 1 (Sample)
Human herpesvirus 1 (Virus from Human herpesvirus 1)

EMD-1308

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Electron cryotomography reveals the portal in the herpesvirus capsid.

Release date: Dec. 6, 2007
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Rixon FJ, Chiu W

J Virol (2007) 81 pp. 2065-2068 [ DOI: doi:10.1128/JVI.02053-06 Pubmed: 17151101 ]

Sample:

Human herpesvirus 1 (888 kDa, Virus from Human herpesvirus 1)
Herpes simplex virus 1 (Sample)

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