Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 9hkv
Q-score: 0.37
Malecki PH, Wozniak K, Ruszkowski M, Brzezinski K
To Be Published
- S-adenosyl-l-homocysteine hydrolase (200 kDa, Complex from Pseudomonas aeruginosa)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Adenosylhomocysteinase (51 kDa, Protein from Pseudomonas aeruginosa PAO1)
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 9hkw
Q-score: 0.448
Malecki PH, Wozniak K, Ruszkowski M, Brzezinski K
To Be Published
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Adenosylhomocysteinase (51 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Potassium ion (39 Da, Ligand)
- Adenosine (267 Da, Ligand)
- S-adenosyl-l-homocysteine hydrolase (200 kDa, Complex from Pseudomonas aeruginosa)
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 9hkx
Q-score: 0.462
Malecki PH, Wozniak K, Ruszkowski M, Brzezinski K
To Be Published
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Adenosylhomocysteinase (51 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Potassium ion (39 Da, Ligand)
- Adenosine (267 Da, Ligand)
- S-adenosyl-l-homocysteine hydrolase (200 kDa, Complex from Pseudomonas aeruginosa)
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 9hky
Q-score: 0.339
Malecki PH, Wozniak K, Ruszkowski M, Brzezinski K
To Be Published
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Adenosylhomocysteinase (51 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Potassium ion (39 Da, Ligand)
- Adenosine (267 Da, Ligand)
- S-adenosyl-l-homocysteine hydrolase (200 kDa, Complex from Pseudomonas aeruginosa)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9hkz
Q-score: 0.344
Malecki PH, Wozniak K, Ruszkowski M, Brzezinski K
To Be Published
- S-adenosyl-l-homocysteine hydrolase (200 kDa, Complex from Pseudomonas aeruginosa)
- Adenosylhomocysteinase (51 kDa, Protein from Pseudomonas aeruginosa)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Adenosine (267 Da, Ligand)
Resolution: 4.2 Å
EM Method: Helical reconstruction
Fitted PDBs: 8s70
Q-score: 0.245
Vascon F, De Felice S, Gasparotto M, Huber ST, Catalano C, Chinellato M, Mezzetti R, Grinzato A, Filippini F, Maso L, Jakobi AJ, Cendron L
iScience (2025) 28 pp. 111726-111726 [ DOI: doi:10.1016/j.isci.2024.111726 Pubmed: 39898034 ]
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Recombinase a (reca) assembled onto ssdna 72-mer in presence of atpgs and mg2+ (Complex)
- Ssdna (Complex from synthetic construct)
- Dna (1 kDa, DNA from synthetic construct)
- Recombinase a (reca) (Complex from Pseudomonas aeruginosa PAO1)
- Protein reca (35 kDa, Protein from Pseudomonas aeruginosa)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of Pseudomonas aeruginosa Recombinase A (RecA) in complex with LexAS125A mutant
Resolution: 3.43 Å
EM Method: Single-particle
Fitted PDBs: 8s7g
Q-score: 0.392
Vascon F, De Felice S, Gasparotto M, Huber ST, Catalano C, Chinellato M, Mezzetti R, Grinzato A, Filippini F, Maso L, Jakobi AJ, Cendron L
iScience (2025) 28 pp. 111726-111726 [ DOI: doi:10.1016/j.isci.2024.111726 Pubmed: 39898034 ]
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Ssdna (Complex from synthetic construct)
- Dna (36-mer) (10 kDa, DNA from synthetic construct)
- Protein reca (38 kDa, Protein from Pseudomonas aeruginosa)
- Recombinase a (reca) and lexa repressor (Complex from Pseudomonas aeruginosa)
- Cryo-em structure of pseudomonas aeruginosa recombinase a (reca) in complex with lexas125a mutant (Complex)
- Magnesium ion (24 Da, Ligand)
- Lexa repressor (23 kDa, Protein from Pseudomonas aeruginosa)
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 9cod
Q-score: 0.295
Lokareddy RK, Hou CD, Forti F, Iglesias SM, Li F, Pavlenok M, Horner DS, Niederweis M, Briani F, Cingolani G
Nat Commun (2024) 15 pp. 8482-8482 [ Pubmed: 39353939 DOI: doi:10.1038/s41467-024-52752-1 ]
Cryo-EM structure of the full-length Pseudomonas aeruginosa bacteriophytochrome in its Pr state
Bodizs S, Meszaros P, Grunewald L, Takala H, Westenhoff S
Structure (2024) 32 pp. 1952-1962.e3 [ Pubmed: 39216473 DOI: doi:10.1016/j.str.2024.08.008 ]
- Bacteriophytochrome (82 kDa, Protein from Pseudomonas aeruginosa)
- Homodimeric complex of the protein bacteriophytochrome containing its cofactor biliverdin (160 kDa, Complex from Pseudomonas aeruginosa)
- 3-[2-[(z)-[3-(2-carboxyethyl)-5-[(z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(z)-[(3e)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1h-pyrrol-3- yl]propanoic acid (585 Da, Ligand)
Cryo-EM structure of the full-length Pseudomonas aeruginosa bacteriophytochrome in its Pfr state
Bodizs S, Meszaros P, Grunewald L, Takala H, Westenhoff S
Structure (2024) 32 pp. 1952-1962.e3 [ Pubmed: 39216473 DOI: doi:10.1016/j.str.2024.08.008 ]
- Bacteriophytochrome (82 kDa, Protein from Pseudomonas aeruginosa)
- Homodimeric complex of the protein bacteriophytochrome containing its cofactor biliverdin (160 kDa, Complex from Pseudomonas aeruginosa)
- 3-[2-[(z)-[3-(2-carboxyethyl)-5-[(z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(z)-[(3e)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1h-pyrrol-3- yl]propanoic acid (585 Da, Ligand)