'Thermus thermophilus PilF ATPase (apoprotein form)
Resolution: 8.0 Å
EM Method: Single-particle
Fitted PDBs: 6ejf
Q-score: 0.069
Collins R, Karuppiah V, Siebert CA, Dajani R, Thistlethwaite A, Derrick JP
Sci Rep (2018) 8 pp. 14022-14022 [ DOI: doi:10.1038/s41598-018-32218-3 Pubmed: 30232337 ]
- Type iv pilus assembly protein pilf (45 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- Type iv pilus assembly protein pilf (16 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- Type iv pilus assembly protein pilf (15 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- Thermus thermophilus pilf atpase (amppnp-bound form) (Complex from Thermus thermophilus HB8)
Thermus thermophilus PilF ATPase (AMPPNP-bound form)
Resolution: 8.0 Å
EM Method: Single-particle
Fitted PDBs: 6f8l
Q-score: 0.075
Collins R, Karuppiah V, Siebert CA, Dajani R, Thistlethwaite A, Derrick JP
Sci Rep (2018) 8 pp. 14022-14022 [ DOI: doi:10.1038/s41598-018-32218-3 Pubmed: 30232337 ]
Thermus thermophilus V/A-ATPase bound to VH dAbs
Resolution: 8.7 Å
EM Method: Single-particle
Fitted PDBs: 5tsj
Q-score: 0.176
Davies RB, Smits C, Wong AS, Stock D, Christie M, Sandin S, Stewart AG
J Struct Biol (2017) 197 pp. 350-353 [ Pubmed: 28115258 DOI: doi:10.1016/j.jsb.2017.01.002 ]
- V-type atp synthase subunit c (35 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- V-type atp synthase subunit e (20 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- V-type atp synthase alpha chain (63 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- Thermus thermophilus v/a-atpase bound to vh dabs (Complex from Homo sapiens)
- Archaeal/vacuolar-type h+-atpase subunit i (72 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- Human heavy chain domain antibody (16 kDa, Protein from Homo sapiens)
- V-type atpase subunit g (11 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- V-type atp synthase subunit f (10 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- V-type atp synthase beta chain (50 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- Vacuolar type atp synthase subunit (9 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
- V-type atp synthase subunit d (23 kDa, Protein from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
Structure of bacterial 30S-IF1-IF2-IF3-mRNA translation pre-initiation complex (state-I)
Hussain T, Llacer JL, Wimberly BT, Kieft JS, Ramakrishnan V
Cell (2016) 167 pp. 133-144.e13 [ Pubmed: 27662086 DOI: doi:10.1016/j.cell.2016.08.074 ]
Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-II)
Hussain T, Llacer JL, Wimberly BT, Kieft JS, Ramakrishnan V
Cell (2016) 167 pp. 133-144.e13 [ Pubmed: 27662086 DOI: doi:10.1016/j.cell.2016.08.074 ]
Cryo-EM structure of T. thermophilus 30S Translation Initiation complex
Resolution: 11.5 Å
EM Method: Single-particle
Fitted PDBs: 3j4j
Q-score: 0.057
Simonetti A, Marzi S, Billas IML, Tsai A, Fabbretti A, Myasnikov A, Roblin P, Vaiana AC, Hazemann I, Eiler D, Steitz TA, Puglisi JD, Gualerzi GO, Klaholz BP
PNAS (2013) 110 pp. 15656-15661 [ DOI: doi:10.1073/pnas.1309578110 Pubmed: 24029017 ]
- Translation initiation factor 1 (8 kDa, Protein from Thermus thermophilus HB8)
- Bacterial 30s translation initiation complex from t. thermophilus containing 30s, if1, if2, mrna and fmet-trna. the structure have been used for modeling full atom if2. (900 kDa, Sample)
- Fmet-trna (RNA from Escherichia coli)
- 30s (850 kDa, Complex from Thermus thermophilus HB8)
- Mrna (RNA from synthetic construct)
- Translation initiation factor 2 (63 kDa, Protein from Thermus thermophilus HB8)
Resolution: 9.7 Å
EM Method: Single-particle
Fitted PDBs: 3j0j
Q-score: 0.144
Nature (2012) 481 pp. 214-218 [ Pubmed: 22178924 DOI: doi:10.1038/nature10699 ]
- V-type atpase (600 kDa, Protein from Thermus thermophilus HB8)
- Thermus thermophilus v-type atpase/atp synthase solubilized with detergent (600 kDa, Sample)
Cryo-EM structure of prokaryotic 30S Translation Initiation Complex.
Simonetti A, Marzi S, Myasnikov AG, Fabbretti A, Yusupov M, Gualerzi CO, Klaholz BP
Nature (2008) 455 pp. 416-420 [ Pubmed: 18758445 DOI: doi:10.1038/nature07192 ]
- Translation initiation factor if1 (8 kDa, Protein from Thermus thermophilus HB8)
- 30s (850 kDa, Complex from Thermus thermophilus HB8)
- Prokaryotic 30s translation initiation complex. t. thermophilus 30s ribosomal subunit complexed with t. thermophilus if1, t. thermophilus if2, e. coli fmet-trna and mk27 mrna. (900 kDa, Sample)
- Messanger rna (8 kDa, RNA from Escherichia coli)
- Translation initiation factor if2 (63 kDa, Protein from Thermus thermophilus HB8)
- Fmet-trnafmet (25 kDa, RNA from Escherichia coli)
Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M, Klaholz BP
Nat Struct Mol Biol (2005) 12 pp. 1145-1149 [ DOI: doi:10.1038/nsmb1012 Pubmed: 16284619 ]
- Initiation factor 2 (Protein from Thermus thermophilus HB8)
- 70s (Complex from Thermus thermophilus HB8)
- Formyl-methionyl-rna (RNA from Thermus thermophilus HB8)
- Messenger rna (RNA from Thermus thermophilus HB8)
- Ribosome complex with initiation factor 2 in gtp state (2 MDa, Sample)
Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M, Klaholz BP
Nat Struct Mol Biol (2005) 12 pp. 1145-1149 [ DOI: doi:10.1038/nsmb1012 Pubmed: 16284619 ]
- Initiation factor 2 (Protein from Thermus thermophilus HB8)
- Ribosome complex with initiation factor 2 in gdp state (2 MDa, Sample)
- Formyl-methionyl-rna (RNA from Escherichia coli)
- 70s (Complex from Thermus thermophilus HB8)
- Messenger rna (RNA from Thermus thermophilus HB8)