DNA-PKcs, Ku, DNA and LigIV N-BRCT in the NHEJ Long-range synaptic complex
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Dnapk complex and ligiv n-brct in the long-range synaptic complex of nhej (630 kDa, Complex from Homo sapiens)
- Dna (30-mer) (DNA from Homo sapiens)
- Xrcc6_human x-ray repair cross-complementing protein 6 (Protein from Homo sapiens)
- Prkdc_human dna-dependent protein kinase catalytic subunit (Protein from Homo sapiens)
- Dna (31-mer) (DNA from Homo sapiens)
- Xrcc5_human x-ray repair cross-complementing protein 5 (Protein from Homo sapiens)
- Dnli4_human dna ligase 4 (Protein from Homo sapiens)
XLF, XRCC4 and LigIV C-BRCT in the NHEJ Long-range synaptic complex
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Xrcc4_human dna repair protein xrcc4 (Protein from Homo sapiens)
- Xlf, xrcc4 and ligiv c-brct in the nhej long-range synaptic complex (250 kDa, Complex from Homo sapiens)
- Nhej1_human non-homologous end-joining factor 1 (Protein from Homo sapiens)
- Dnli4_human dna ligase 4 (Protein from Homo sapiens)
NHEJ Long-range synaptic complex
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7lt3
Q-score: 0.118
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna (31-mer) (9 kDa, DNA from Homo sapiens)
- Long-range synaptic complex of nhej (1 MDa, Complex from Homo sapiens)
- Unknown peptide (1 kDa, Protein from Homo sapiens)
- Dna (30-mer) (9 kDa, DNA from Homo sapiens)
- X-ray repair cross-complementing protein 6 (69 kDa, Protein from Homo sapiens)
- Non-homologous end-joining factor 1 (33 kDa, Protein from Homo sapiens)
- Dna ligase 4 (104 kDa, Protein from Homo sapiens)
- Dna-dependent protein kinase catalytic subunit (469 kDa, Protein from Homo sapiens)
- Dna repair protein xrcc4 (38 kDa, Protein from Homo sapiens)
- X-ray repair cross-complementing protein 5 (82 kDa, Protein from Homo sapiens)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6avo
Q-score: 0.431
Santos RLA, Bai L, Singh PK, Murakami N, Fan H, Zhan W, Zhu Y, Jiang X, Zhang K, Assker JP, Nathan CF, Li H, Azzi J, Lin G
Nat Commun (2017) 8 pp. 1692-1692 [ Pubmed: 29167449 DOI: doi:10.1038/s41467-017-01760-5 ]
- Proteasome subunit beta type-3 (22 kDa, Protein from Homo sapiens)
- Human immunoproteasome with a novel noncompetitive inhibitor that selectively inhibits activated lymphocytes (Complex from Homo sapiens)
- Proteasome subunit alpha type-5 (26 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-4 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-10 (24 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-6 (27 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-7 (27 kDa, Protein from Homo sapiens)
- N~1~-{2-[([1,1'-biphenyl]-3-carbonyl)amino]ethyl}-n~4~-tert-butyl-n~2~-(3-phenylpropanoyl)-l-aspartamide (542 Da, Ligand)
- Proteasome subunit beta type-2 (22 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-2 (25 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-1 (23 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-4 (24 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-3 (28 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-8 (22 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-9 (21 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-1 (29 kDa, Protein from Homo sapiens)
Chen C, Wang JC-Y, Pierson EE, Kiefer DZ, Delaleau M, Gallucci L, Cazenave C, Kann M, Jarrold MF, Zlotnick A
PLoS Pathog (2016) 12 [ DOI: doi:10.1371/journal.ppat.1005802 Pubmed: 27518410 ]
Chen C, Wang JC-Y, Pierson EE, Kiefer DZ, Delaleau M, Gallucci L, Cazenave C, Kann M, Jarrold MF, Zlotnick A
PLoS Pathog (2016) 12 [ DOI: doi:10.1371/journal.ppat.1005802 Pubmed: 27518410 ]
Chen C, Wang JC-Y, Pierson EE, Kiefer DZ, Delaleau M, Gallucci L, Cazenave C, Kann M, Jarrold MF, Zlotnick A
PLoS Pathog (2016) 12 [ DOI: doi:10.1371/journal.ppat.1005802 Pubmed: 27518410 ]
Chen C, Wang JC-Y, Pierson EE, Kiefer DZ, Delaleau M, Gallucci L, Cazenave C, Kann M, Jarrold MF, Zlotnick A
PLoS Pathog (2016) 12 [ DOI: doi:10.1371/journal.ppat.1005802 Pubmed: 27518410 ]
Chen C, Wang JC-Y, Pierson EE, Kiefer DZ, Delaleau M, Gallucci L, Cazenave C, Kann M, Jarrold MF, Zlotnick A
PLoS Pathog (2016) 12 [ DOI: doi:10.1371/journal.ppat.1005802 Pubmed: 27518410 ]
Chen C, Wang JC-Y, Pierson EE, Kiefer DZ, Delaleau M, Gallucci L, Cazenave C, Kann M, Jarrold MF, Zlotnick A
PLoS Pathog (2016) 12 [ DOI: doi:10.1371/journal.ppat.1005802 Pubmed: 27518410 ]