Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 8xsd
Q-score: -0.008
Chen Z, Feng L, Wang L, Zhang L, Zheng B, Fu H, Li F, Liu L, Lv Q, Deng R, Xu Y, Hu Y, Zheng J, Qin C, Bao L, Wang X, Jin Q
Signal Transduct Target Ther (2025) 10 pp. 14-14 [ DOI: doi:10.1038/s41392-024-02114-6 Pubmed: 39800731 ]
- Ba.5 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Cr9 heavy chain (12 kDa, Protein from Homo sapiens)
- Cr9 light chain (11 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Rbd in complex with ace2 (Complex)
SARS-CoV-2 XBB.1.16 Spike in complex with CYFN1006-1(S-CYFN1006-1 dimer trimer).
Resolution: 5.41 Å
EM Method: Single-particle
Fitted PDBs: 8z6q
Q-score: 0.135
To Be Published
- Cyfn1006-1 light chain (22 kDa, Protein from Homo sapiens)
- Cyfn1006-1 heavy chain (49 kDa, Protein from Homo sapiens)
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
- Sars-cov-2 xbb.1.16 spike in complex with cyfn1006-1(s-cyfn1006-1 dimer trimer). (Complex from Severe acute respiratory syndrome coronavirus 2)
Structure of XBB.1.16 S trimer with 2 down-RBDs complex with antibody CYFN1006-1.
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8z6s
Q-score: 0.379
To Be Published
- Cyfn1006-1 light chain (22 kDa, Protein from Homo sapiens)
- Cyfn1006-1 heavy chain (49 kDa, Protein from Homo sapiens)
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
- Structure of xbb.1.16 s trimer with 2 down-rbds complex with antibody cyfn1006-1. (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 EG.5.1 Spike in complex with CYFN1006-2(S-CYFN1006-2 dimer trimer).
Resolution: 3.83 Å
EM Method: Single-particle
Fitted PDBs: 8z6u
Q-score: 0.078
To Be Published
- Cyfn1006-2 light chain (22 kDa, Protein from Homo sapiens)
- Cyfn1006-2 heavy chain (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 eg.5.1 spike in complex with cyfn1006-2(s-cyfn1006-2 dimer trimer). (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
Structure of EG.5.1 S trimer with 3 down-RBDs complex with antibody CYFN1006-2.
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 8z6w
Q-score: 0.351
To Be Published
- Structure of eg.5.1 s trimer with 3 down-rbds complex with antibody cyfn1006-2. (Complex from Severe acute respiratory syndrome coronavirus 2)
- Cyfn1006-2 light chain (22 kDa, Protein from Homo sapiens)
- Cyfn1006-2 heavy chain (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 8z86
Q-score: 0.452
Chen Z, Feng L, Wang L, Zhang L, Zheng B, Fu H, Li F, Liu L, Lv Q, Deng R, Xu Y, Hu Y, Zheng J, Qin C, Bao L, Wang X, Jin Q
Signal Transduct Target Ther (2025) 10 pp. 14-14 [ DOI: doi:10.1038/s41392-024-02114-6 Pubmed: 39800731 ]
- Spike protein s1 (25 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Cr9 heavy chain (12 kDa, Protein from Homo sapiens)
- Ba.5 rbd in complex with cr9 (Complex from Homo sapiens)
- Cr9 light chain (11 kDa, Protein from Homo sapiens)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 8z3w
Q-score: 0.297
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- D614g spike protein (s) in complex with one ace2 (Complex)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8z4x
Q-score: 0.271
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- D614g spike protein (s) in complex with two ace2s (Complex)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 8z64
Q-score: 0.415
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
- D614g spike protein (s) in complex with three ace2s (focused on ntd-sd1-rbd-ace2) (Complex)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8z6a
Q-score: 0.258
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- D614g spike protein (s) in complex with three ace2s (Complex)
- D614g spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)