Structure of OC43 spike in complex with polyclonal Fab1 (Donor 269)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7sb3
Q-score: 0.496
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Structure of oc43 spike in complex with polyclonal fab1 (donor 269) (Complex from Human coronavirus OC43)
Structure of OC43 spike in complex with polyclonal Fab2 (Donor 1412)
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 7sb4
Q-score: 0.302
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human polyclonal fab model with polyalanine backbone - heavy chain (9 kDa, Protein from Homo sapiens)
- Sapienic acid (254 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Structure of oc43 spike in complex with polyclonal fab2 (donor 1412) (Complex from Human coronavirus OC43)
Structure of OC43 spike in complex with polyclonal Fab3 (Donor 1412)
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7sb5
Q-score: 0.379
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- Structure of oc43 spike in complex with polyclonal fab3 (donor 1412) (Complex from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Human polyclonal fab model with polyalanine backbone - heavy chain (9 kDa, Protein from Homo sapiens)
Structure of OC43 spike in complex with polyclonal Fab4 (Donor 269)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7sbv
Q-score: 0.544
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Human polyclonal fab model with polyalanine backbone - heavy chain (9 kDa, Protein from Homo sapiens)
- Structure of oc43 spike in complex with polyclonal fab4 (donor 269) (Complex from Human coronavirus OC43)
Structure of OC43 spike in complex with polyclonal Fab5 (Donor 1051)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7sbw
Q-score: 0.533
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
- Structure of oc43 spike in complex with polyclonal fab5 (donor 1051) (Complex from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
Structure of OC43 spike in complex with polyclonal Fab6 (Donor 1051)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7sbx
Q-score: 0.571
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
- Sapienic acid (254 Da, Ligand)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Structure of oc43 spike in complex with polyclonal fab6 (donor 1051) (Complex from Human coronavirus OC43)
Structure of OC43 spike in complex with polyclonal Fab7 (Donor 269)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7sby
Q-score: 0.586
Bangaru S, Antanasijevic A, Kose N, Sewall LM, Jackson AM, Suryadevara N, Zhan X, Torres JL, Copps J, de la Pena AT, Crowe Jr JE, Ward AB
Sci Adv (2022) 8 pp. eabn2911-eabn2911 [ Pubmed: 35507649 DOI: doi:10.1126/sciadv.abn2911 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sapienic acid (254 Da, Ligand)
- Structure of oc43 spike in complex with polyclonal fab7 (donor 269) (Complex from Human coronavirus OC43)
- Spike protein (151 kDa, Protein from Human coronavirus OC43)
- Human polyclonal fab model with polyalanine backbone - heavy chain (10 kDa, Protein from Homo sapiens)
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 46C12 antibody Fab fragment
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7pnm
Q-score: 0.315
Wang C, Hesketh EL, Shamorkina TM, Li W, Franken PJ, Drabek D, van Haperen R, Townend S, van Kuppeveld FJM, Grosveld F, Ranson NA, Snijder J, de Groot RJ, Hurdiss DL, Bosch BJ
Nat Commun (2022) 13 pp. 2921-2921 [ DOI: doi:10.1038/s41467-022-30658-0 Pubmed: 35614127 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (146 kDa, Protein from Human coronavirus OC43)
- 46c12 antibody heavy chain (13 kDa, Protein from Homo sapiens)
- 46c12 antibody light chain (12 kDa, Protein from Homo sapiens)
- Human coronavirus oc43 spike glycoprotein ectodomain in complex with the 46c12 antibody fab fragment (583 kDa, Complex from Human coronavirus OC43)
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 43E6 antibody Fab fragment
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7pnq
Q-score: 0.166
Wang C, Hesketh EL, Shamorkina TM, Li W, Franken PJ, Drabek D, van Haperen R, Townend S, van Kuppeveld FJM, Grosveld F, Ranson NA, Snijder J, de Groot RJ, Hurdiss DL, Bosch BJ
Nat Commun (2022) 13 pp. 2921-2921 [ DOI: doi:10.1038/s41467-022-30658-0 Pubmed: 35614127 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human coronavirus oc43 spike glycoprotein ectodomain in complex with the 43e6 antibody fab fragment (583 kDa, Complex from Human coronavirus OC43)
- 43e6 antibody heavy chain (13 kDa, Protein from Homo sapiens)
- 43e6 antibody light chain (11 kDa, Protein from Homo sapiens)
- Spike glycoprotein (146 kDa, Protein from Human coronavirus OC43)
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 47C9 antibody Fab fragment
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7po5
Q-score: 0.306
Wang C, Hesketh EL, Shamorkina TM, Li W, Franken PJ, Drabek D, van Haperen R, Townend S, van Kuppeveld FJM, Grosveld F, Ranson NA, Snijder J, de Groot RJ, Hurdiss DL, Bosch BJ
Nat Commun (2022) 13 pp. 2921-2921 [ DOI: doi:10.1038/s41467-022-30658-0 Pubmed: 35614127 ]
- Human coronavirus oc43 spike glycoprotein ectodomain in complex with the 47c9 antibody fab fragment (583 kDa, Complex from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (146 kDa, Protein from Human coronavirus OC43)
- 47c9 antibody heavy chain (13 kDa, Protein from Homo sapiens)
- 47c9 antibody light chain (11 kDa, Protein from Homo sapiens)