DNA Polymerase Beta bound to a nucleosome containing a 1-nt gap at SHL-3.5
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 9dwk
Q-score: 0.297
Weaver TM, Ryan BJ, Freudenthal BD
To Be Published
- Histone h2a type 1 (13 kDa, Protein from Homo sapiens)
- Dna polymerase beta bound to a nucleosome containing a 1-nt gap at shl-3.5 (Complex from Homo sapiens)
- 601 k strand (damaged strand 2) (12 kDa, DNA from synthetic construct)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- 601 i strand (damaged strand 1) (32 kDa, DNA from synthetic construct)
- 601 j strand (non-damaged strand) (45 kDa, DNA from synthetic construct)
- Histone h3.2 (15 kDa, Protein from Homo sapiens)
- Dna polymerase beta (38 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
DNA polymerase Beta bound to a nucleosome containing a 1-nt gap at SHL-5.5
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 9dwm
Q-score: 0.31
Ryan BJ, Weaver TM, Freudenthal BD
To Be Published
- Histone h2a type 1 (13 kDa, Protein from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- 601 j strand (non-damaged strand) (45 kDa, DNA from synthetic construct)
- Dna polymerase beta (38 kDa, Protein from Homo sapiens)
- Histone h3.2 (15 kDa, Protein from Homo sapiens)
- 601 k strand (damaged strand 2) (5 kDa, DNA from synthetic construct)
- Nucleosome containing a 1-nt gap at shl-5.5 (Complex from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- 601 i strand (damaged strand 1) (38 kDa, DNA from synthetic construct)
Rapid screening cryo-EM map of CAK bound to ICEC0768 (grid VC2-1, 1hr collection)
Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ
Nat Commun (2024) 15 pp. 2265-2265 [ Pubmed: 38480681 DOI: doi:10.1038/s41467-024-46375-9 ]
- Cdk7 (Protein from Homo sapiens)
- Cyclin h (Protein from Homo sapiens)
- Mat1 (Protein from Homo sapiens)
- Cdk-activating kinase (85 kDa, Complex from Homo sapiens)
Rapid screening cryo-EM map of CAK bound to ICEC0768 (grid VC2-2, 1hr collection)
Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ
Nat Commun (2024) 15 pp. 2265-2265 [ Pubmed: 38480681 DOI: doi:10.1038/s41467-024-46375-9 ]
- Cdk7 (Protein from Homo sapiens)
- Cyclin h (Protein from Homo sapiens)
- Mat1 (Protein from Homo sapiens)
- Cdk-activating kinase (85 kDa, Complex from Homo sapiens)
Rapid screening cryo-EM map of CAK bound to ICEC0914 (grid VC3-1, 1hr collection)
Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ
Nat Commun (2024) 15 pp. 2265-2265 [ Pubmed: 38480681 DOI: doi:10.1038/s41467-024-46375-9 ]
- Cdk7 (Protein from Homo sapiens)
- Cyclin h (Protein from Homo sapiens)
- Mat1 (Protein from Homo sapiens)
- Cdk-activating kinase (85 kDa, Complex from Homo sapiens)
Rapid screening cryo-EM map of CAK bound to ICEC0914 (grid VC3-2, 1hr collection)
Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ
Nat Commun (2024) 15 pp. 2265-2265 [ Pubmed: 38480681 DOI: doi:10.1038/s41467-024-46375-9 ]
- Cdk7 (Protein from Homo sapiens)
- Cyclin h (Protein from Homo sapiens)
- Mat1 (Protein from Homo sapiens)
- Cdk-activating kinase (85 kDa, Complex from Homo sapiens)
Rapid screening cryo-EM map of CAK bound to dinaciclib (grid VC4-2, 1hr collection)
Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ
Nat Commun (2024) 15 pp. 2265-2265 [ Pubmed: 38480681 DOI: doi:10.1038/s41467-024-46375-9 ]
- Cdk7 (Protein from Homo sapiens)
- Cyclin h (Protein from Homo sapiens)
- Mat1 (Protein from Homo sapiens)
- Cdk-activating kinase (85 kDa, Complex from Homo sapiens)
Rapid screening cryo-EM map of CAK bound to ICEC0574 (grid VC11-3, 1hr collection)
Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ
Nat Commun (2024) 15 pp. 2265-2265 [ Pubmed: 38480681 DOI: doi:10.1038/s41467-024-46375-9 ]
- Cdk7 (Protein from Homo sapiens)
- Cyclin h (Protein from Homo sapiens)
- Mat1 (Protein from Homo sapiens)
- Cdk-activating kinase (85 kDa, Complex from Homo sapiens)
Rapid screening cryo-EM map of CAK bound to ICEC0942 (grid VC13-2, 1hr collection)
Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ
Nat Commun (2024) 15 pp. 2265-2265 [ Pubmed: 38480681 DOI: doi:10.1038/s41467-024-46375-9 ]
- Cdk7 (Protein from Homo sapiens)
- Cyclin h (Protein from Homo sapiens)
- Mat1 (Protein from Homo sapiens)
- Cdk-activating kinase (85 kDa, Complex from Homo sapiens)