Cryo-EM of the SLFN12-PDE3A complex: Consensus subset model
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 7lrd
Q-score: 0.434
Garvie CW, Wu X, Papanastasiou M, Lee S, Fuller J, Schnitzler GR, Horner SW, Baker A, Zhang T, Mullahoo JP, Westlake L, Hoyt SH, Toetzl M, Ranaghan MJ, de Waal L, McGaunn J, Kaplan B, Piccioni F, Yang X, Lange M, Tersteegen A, Raymond D, Lewis TA, Carr SA, Cherniack AD, Lemke CT, Meyerson M, Greulich H
Nat Commun (2021) 12 pp. 4375-4375 [ DOI: doi:10.1038/s41467-021-24495-w Pubmed: 34272366 ]
- Magnesium ion (24 Da, Ligand)
- Manganese (ii) ion (54 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- (4~{r})-3-[4-(diethylamino)-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]-4-methyl-4,5-dihydro-1~{h}-pyridazin-6-one (305 Da, Ligand)
- Schlafen family member 12 (67 kDa, Protein from Homo sapiens)
- Slfn12-pde3a complex, consensus subset model (Complex from Homo sapiens)
- Cgmp-inhibited 3',5'-cyclic phosphodiesterase a (57 kDa, Protein from Homo sapiens)
AAV8 human HEK293-produced, full capsid
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6pwa
Q-score: 0.563
Rumachik NG, Malaker SA, Poweleit N, Maynard LH, Adams CM, Leib RD, Cirolia G, Thomas D, Stamnes S, Holt K, Sinn P, May AP, Paulk NK
Mol Ther Methods Clin Dev (2020) 18 pp. 98-118 [ DOI: doi:10.1016/j.omtm.2020.05.018 Pubmed: 32995354 ]
- Capsid protein (58 kDa, Protein from Adeno-associated virus - 8)
- Adeno-associated virus-8 (Virus from Adeno-associated virus-8)
AAV8 human HEK293-produced, empty capsid
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6u20
Q-score: 0.387
Rumachik NG, Malaker SA, Poweleit N, Maynard LH, Adams CM, Leib RD, Cirolia G, Thomas D, Stamnes S, Holt K, Sinn P, May AP, Paulk NK
Mol Ther Methods Clin Dev (2020) 18 pp. 98-118 [ DOI: doi:10.1016/j.omtm.2020.05.018 Pubmed: 32995354 ]
- Adeno-associated virus - 8 (Virus from Adeno-associated virus - 8)
- Capsid protein (58 kDa, Protein from Adeno-associated virus - 8)
AAV8 Baculovirus-Sf9 produced, full capsid
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6u2v
Q-score: 0.472
Rumachik NG, Malaker SA, Poweleit N, Maynard LH, Adams CM, Leib RD, Cirolia G, Thomas D, Stamnes S, Holt K, Sinn P, May AP, Paulk NK
Mol Ther Methods Clin Dev (2020) 18 pp. 98-118 [ DOI: doi:10.1016/j.omtm.2020.05.018 Pubmed: 32995354 ]
- Adeno-associated virus - 8 (Virus from Adeno-associated virus - 8)
- Capsid protein (58 kDa, Protein from Adeno-associated virus - 8)
AAV8 Baculovirus-Sf9 produced, empty capsid
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6ubm
Q-score: 0.373
Rumachik NG, Malaker SA, Poweleit N, Maynard LH, Adams CM, Leib RD, Cirolia G, Thomas D, Stamnes S, Holt K, Sinn P, May AP, Paulk NK
To Be Published
- Adeno-associated virus - 8 (Virus from Adeno-associated virus - 8)
- Capsid protein (58 kDa, Protein from Adeno-associated virus - 8)