Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 7v0n
Q-score: 0.123
Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE
PNAS (2023) 120 pp. e2213690120-e2213690120 [ Pubmed: 36961925 DOI: doi:10.1073/pnas.2213690120 ]
- Igg 21 fab light chain (18 kDa, Protein from Homo sapiens)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Igg 21 fab heavy chain (20 kDa, Protein from Homo sapiens)
- Spike glycoprotein e1 (43 kDa, Protein from Eastern equine encephalitis virus)
- Spike glycoprotein e2 (38 kDa, Protein from Eastern equine encephalitis virus)
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 7v0o
Q-score: 0.102
Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE
PNAS (2023) 120 pp. e2213690120-e2213690120 [ Pubmed: 36961925 DOI: doi:10.1073/pnas.2213690120 ]
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Spike glycoprotein e1 (43 kDa, Protein from Eastern equine encephalitis virus)
- Spike glycoprotein e2 (38 kDa, Protein from Eastern equine encephalitis virus)
- Igg 94 fab heavy chain (18 kDa, Protein from Homo sapiens)
- Igg 94 fab light chain (17 kDa, Protein from Homo sapiens)
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 7v0p
Q-score: 0.17
Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE
PNAS (2023) 120 pp. e2213690120-e2213690120 [ Pubmed: 36961925 DOI: doi:10.1073/pnas.2213690120 ]
- Igg 106 fab heavy chain (19 kDa, Protein from Homo sapiens)
- Igg 106 fab light chain (18 kDa, Protein from Homo sapiens)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Spike glycoprotein e1 (43 kDa, Protein from Eastern equine encephalitis virus)
- Spike glycoprotein e2 (38 kDa, Protein from Eastern equine encephalitis virus)
Structure of dengue virus (DENV2) in complex with prM12, an anti-PrM monoclonal antibody
Resolution: 10.2 Å
EM Method: Single-particle
Fitted PDBs: 8fe3
Q-score: 0.059
A Dowd K, Sirohi D, D Speer S, VanBlargan LA, Chen RE, Mukherjee S, Whitener BM, Govero J, Aleshnick M, Larman B, Sukupolvi-Petty S, Sevvana M, Miller AS, Klose T, Zheng A, Koenig S, Kielian M, Kuhn RJ, Diamond MS, Pierson TC
PNAS (2023) 120 pp. e2218899120-e2218899120 [ Pubmed: 36638211 DOI: doi:10.1073/pnas.2218899120 ]
- Dengue virus 2 (Virus from Dengue virus 2)
- Prm12 fab heavy chain (24 kDa, Protein from Mus musculus)
- Envelope protein e (43 kDa, Protein from Dengue virus type 2)
- Prm12 fab light chain (23 kDa, Protein from Mus musculus)
- Prm protein (9 kDa, Protein from Dengue virus type 2)
Structure of dengue virus (DENV2) in complex with prM13, an anti-PrM monoclonal antibody
Resolution: 9.8 Å
EM Method: Single-particle
Fitted PDBs: 8fe4
Q-score: 0.062
A Dowd K, Sirohi D, D Speer S, VanBlargan LA, Chen RE, Mukherjee S, Whitener BM, Govero J, Aleshnick M, Larman B, Sukupolvi-Petty S, Sevvana M, Miller AS, Klose T, Zheng A, Koenig S, Kielian M, Kuhn RJ, Diamond MS, Pierson TC
PNAS (2023) 120 pp. e2218899120-e2218899120 [ Pubmed: 36638211 DOI: doi:10.1073/pnas.2218899120 ]
- Dengue virus 2 (Virus from Dengue virus 2)
- Prm13 fab light chain (23 kDa, Protein from Mus musculus)
- Prm13 fab heavy chain (23 kDa, Protein from Mus musculus)
- Envelope protein e (43 kDa, Protein from Dengue virus type 2)
- Prm protein (9 kDa, Protein from Dengue virus type 2)
Cryo-EM Structure of Immature Zika Virus
Resolution: 9.1 Å
EM Method: Single-particle
Fitted PDBs: 5u4w
Q-score: 0.079
Prasad VM, Miller AS, Klose T, Sirohi D, Buda G, Jiang W, Kuhn RJ, Rossmann MG
Nat Struct Mol Biol (2017) 24 pp. 184-186 [ Pubmed: 28067914 DOI: doi:10.1038/nsmb.3352 ]
- Protein e (6 kDa, Protein from Zika virus)
- E protein (44 kDa, Protein from Zika virus)
- M protein (5 kDa, Protein from Zika virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Beta-d-mannopyranose (180 Da, Ligand)
- Transmembrane domains (Complex from Zika virus)
- Zika virus (Virus from Zika virus)
- Pr domain (9 kDa, Protein from Zika virus)
The cryo-EM structure of Zika Virus
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 5ire
Q-score: 0.425
Sirohi D, Chen Z, Sun L, Klose T, Pierson TC, Rossmann MG, Kuhn RJ
Science (2016) 352 pp. 467-470 [ Pubmed: 27033547 DOI: doi:10.1126/science.aaf5316 ]
- Zika virus (Virus from Zika virus)
- M protein (8 kDa, Protein from Zika virus)
- E protein (54 kDa, Protein from Zika virus)