Muscarinic acetylcholine receptor 1-G11 protein complex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6oij
Q-score: 0.504
Maeda S, Qu Q, Robertson MJ, Skiniotis G, Kobilka BK
Science (2019) 364 pp. 552-557 [ Pubmed: 31073061 DOI: doi:10.1126/science.aaw5188 ]
- Muscarinic acetylcholine receptor 1 in complex with heterotrimeric g11 protein (150 kDa, Complex)
- Guanine nucleotide-binding protein g(i) subunit alpha-1,guanine nucleotide-binding protein subunit alpha-11 (41 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- 4-(4,5-dihydro-1,2-oxazol-3-yloxy)-n,n,n-trimethylbut-2-yn-1-aminium (197 Da, Ligand)
- Cholesterol hemisuccinate (486 Da, Ligand)
- Guanine nucleotide-binding protein g(i) subunit alpha-1,guanine nucleotide-binding protein subunit alpha-11, antibody fragment, guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1, guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (Complex from Homo sapiens)
- Antibody fragment (27 kDa, Protein from Mus musculus)
- Muscarinic acetylcholine receptor m1 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
- Muscarinic acetylcholine receptor m1 (41 kDa, Protein from Homo sapiens)
Muscarinic acetylcholine receptor 2-Go complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6oik
Q-score: 0.464
Maeda S, Qu Q, Robertson MJ, Skiniotis G, Kobilka BK
Science (2019) 364 pp. 552-557 [ Pubmed: 31073061 DOI: doi:10.1126/science.aaw5188 ]
- Guanine nucleotide-binding protein g(o) subunit alpha (40 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(o) subunit alpha, guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1, guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2, antibody fragment (Complex from Homo sapiens)
- Muscarinic acetylcholine receptor m2 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- 4-(4,5-dihydro-1,2-oxazol-3-yloxy)-n,n,n-trimethylbut-2-yn-1-aminium (197 Da, Ligand)
- Antibody fragment (27 kDa, Protein from Mus musculus)
- 3-amino-5-chloro-n-cyclopropyl-4-methyl-6-[2-(4-methylpiperazin-1-yl)-2-oxoethoxy]thieno[2,3-b]pyridine-2-carboxamide (437 Da, Ligand)
- Muscarinic acetylcholine receptor 2 in complex with heterotrimeric goa protein (150 kDa, Complex)
- Muscarinic acetylcholine receptor m2,muscarinic acetylcholine receptor m2 (39 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
Structure of Dot1L-H2BK120ub nucleosome complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6nn6
Q-score: 0.371
Anderson CJ, Baird MR, Hsu A, Barbour EH, Koyama Y, Borgnia MJ, McGinty RK
Cell Rep (2019) 26 pp. 1681-1690.e5 [ Pubmed: 30759380 DOI: doi:10.1016/j.celrep.2019.01.058 ]
- Dna (145-mer) (44 kDa, DNA from synthetic construct)
- Ubiquitin (8 kDa, Protein from Homo sapiens)
- Histone-lysine n-methyltransferase, h3 lysine-79 specific (47 kDa, Protein from Homo sapiens)
- Histone h3.2 (15 kDa, Protein from Xenopus laevis)
- Dna (145-mer) (44 kDa, DNA from synthetic construct)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Histone h2a type 1 (13 kDa, Protein from Xenopus laevis)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Dot1l-h2bk120ub nucleosome complex (class 2a) (270 kDa, Complex from Homo sapiens)
Cannabinoid Receptor 1-G Protein Complex
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6n4b
Q-score: 0.506
Krishna Kumar K, Shalev-Benami M, Robertson MJ, Hu H, Banister SD, Hollingsworth SA, Latorraca NR, Kato HE, Hilger D, Maeda S, Weis WI, Farrens DL, Dror RO, Malhotra SV, Kobilka BK, Skiniotis G
Cell (2019) 176 pp. 448- [ Pubmed: 30639101 DOI: doi:10.1016/j.cell.2018.11.040 ]
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Scfv16 (27 kDa, Protein from Mus musculus)
- Cannabinoid receptor 1-g protein complex (Complex from Homo sapiens)
- Cannabinoid receptor 1 (55 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Methyl n-{1-[(4-fluorophenyl)methyl]-1h-indazole-3-carbonyl}-3-methyl-l-valinate (397 Da, Ligand)
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 6gsi
Q-score: 0.439
Conley MJ, McElwee M, Azmi L, Gabrielsen M, Byron O, Goodfellow IG, Bhella D
Nature (2019) 565 pp. 377-381 [ Pubmed: 30626974 DOI: doi:10.1038/s41586-018-0852-1 ]
- Vp2 - portal. (Complex from Feline calicivirus strain F9)
- Junctional adhesion molecule a (22 kDa, Protein from Felis catus)
- Vp2 (12 kDa, Protein from Feline calicivirus strain F9)
- Potassium ion (39 Da, Ligand)
- Feline calicivirus strain f9 (Virus from Feline calicivirus strain F9)
- Feline junctional adhesion molecule a (Complex from Felis catus)
- Capsid protein (73 kDa, Protein from Feline calicivirus strain F9)
- Feline calicivirus strain f9 (Virus)
CryoEM structure of E.coli his pause elongation complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6asx
Q-score: 0.436
Kang JY, Mishanina TV, Bellecourt MJ, Mooney RA, Darst SA, Landick R
Mol Cell (2018) 69 pp. 802-815.e1 [ Pubmed: 29499135 DOI: doi:10.1016/j.molcel.2018.01.018 ]
- Magnesium ion (24 Da, Ligand)
- Dna (32-mer) (9 kDa, DNA from Salmonella enterica subsp. enterica serovar Typhimurium)
- Dna-directed rna polymerase subunit beta' (155 kDa, Protein from Escherichia coli (strain K12))
- E.coli his pause elongation complex (400 kDa, Complex from Escherichia coli)
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli (strain K12))
- Dna-directed rna polymerase subunit omega (9 kDa, Protein from Escherichia coli)
- Rna (29-mer) (9 kDa, RNA from Salmonella enterica subsp. enterica serovar Typhimurium)
- Zinc ion (65 Da, Ligand)
- Dna-directed rna polymerase subunit alpha (26 kDa, Protein from Escherichia coli)
- Dna (32-mer) (9 kDa, DNA from Salmonella enterica subsp. enterica serovar Typhimurium)
Imidazoleglycerol-phosphate dehydratase
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6ezj
Q-score: 0.533
Rawson S, Bisson C, Hurdiss DL, Fazal A, McPhillie MJ, Sedelnikova SE, Baker PJ, Rice DW, Muench SP
PNAS (2018) 115 pp. 1795-1800 [ Pubmed: 29434040 DOI: doi:10.1073/pnas.1708839115 ]
- Imidazoleglycerol-phosphate dehydratase 2, chloroplastic (22 kDa, Protein from Arabidopsis thaliana)
- Imidazoleglycerol-phosphate dehydratase (igpd2) in complex with triazole-phosphonate inhibitor (c384) (570 kDa, Complex from Arabidopsis thaliana)
- [(2r)-2-hydroxy-3-(1h-1,2,4-triazol-1-yl)propyl]phosphonic acid (207 Da, Ligand)
- Manganese (ii) ion (54 Da, Ligand)
Cryo-EM structure of the T2SS secretin XcpQ from Pseudomonas aeruginosa
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 5wln
Q-score: 0.396
Hay ID, Belousoff MJ, Lithgow T
mBio (2017) 8 [ DOI: doi:10.1128/mBio.01344-17 Pubmed: 29042496 ]
MicroED structure of lysozyme at 1.8 A resolution
Resolution: 1.8 Å
EM Method: Electron Crystallography
Fitted PDBs: 5k7o
Q-score: 0.843
de la Cruz MJ, Hattne J, Shi D, Seidler P, Rodriguez J, Reyes FE, Sawaya MR, Cascio D, Weiss SC, Kim SK, Hinck CS, Hinck AP, Calero G, Eisenberg D, Gonen T
Nat Methods (2017) 14 pp. 399-402 [ Pubmed: 28192420 DOI: doi:10.1038/nmeth.4178 ]
- Water (18 Da, Ligand)
- Lysozyme c (14 kDa, Protein from Gallus gallus)
- Chloride ion (35 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- Lysozyme (14 kDa, Cellular component from Gallus gallus)
MicroED structure of xylanase at 2.3 A resolution
Resolution: 2.3 Å
EM Method: Electron Crystallography
Fitted PDBs: 5k7p
Q-score: 0.724
de la Cruz MJ, Hattne J, Shi D, Seidler P, Rodriguez J, Reyes FE, Sawaya MR, Cascio D, Weiss SC, Kim SK, Hinck CS, Hinck AP, Calero G, Eisenberg D, Gonen T
Nat Methods (2017) 14 pp. 399-402 [ Pubmed: 28192420 DOI: doi:10.1038/nmeth.4178 ]
- Water (18 Da, Ligand)
- Endo-1,4-beta-xylanase 2 (20 kDa, Protein from Hypocrea jecorina)
- Xylanase (21 kDa, Cellular component from Trichoderma reesei)
- Iodide ion (126 Da, Ligand)