Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 8xsd
Q-score: -0.008
Chen Z, Feng L, Wang L, Zhang L, Zheng B, Fu H, Li F, Liu L, Lv Q, Deng R, Xu Y, Hu Y, Zheng J, Qin C, Bao L, Wang X, Jin Q
Signal Transduct Target Ther (2025) 10 pp. 14-14 [ DOI: doi:10.1038/s41392-024-02114-6 Pubmed: 39800731 ]
- Ba.5 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Cr9 heavy chain (12 kDa, Protein from Homo sapiens)
- Cr9 light chain (11 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Rbd in complex with ace2 (Complex)
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 8z86
Q-score: 0.452
Chen Z, Feng L, Wang L, Zhang L, Zheng B, Fu H, Li F, Liu L, Lv Q, Deng R, Xu Y, Hu Y, Zheng J, Qin C, Bao L, Wang X, Jin Q
Signal Transduct Target Ther (2025) 10 pp. 14-14 [ DOI: doi:10.1038/s41392-024-02114-6 Pubmed: 39800731 ]
- Spike protein s1 (25 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Cr9 heavy chain (12 kDa, Protein from Homo sapiens)
- Ba.5 rbd in complex with cr9 (Complex from Homo sapiens)
- Cr9 light chain (11 kDa, Protein from Homo sapiens)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9iup
Q-score: 0.489
Feng L, Sun Z, Zhang Y, Jian F, Yang S, Xia K, Yu L, Wang J, Shao F, Wang X, Cao Y
Cell Discov (2024) 10 pp. 123-123 [ Pubmed: 39616168 DOI: doi:10.1038/s41421-024-00752-2 ]
- Kp.3 rbd in complex with ace2 (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Kp.3 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Ace2 (Complex from Homo sapiens)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9iuq
Q-score: 0.499
Feng L, Sun Z, Zhang Y, Jian F, Yang S, Xia K, Yu L, Wang J, Shao F, Wang X, Cao Y
Cell Discov (2024) 10 pp. 123-123 [ Pubmed: 39616168 DOI: doi:10.1038/s41421-024-00752-2 ]
- Kp.2 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Kp.2 rbd in complex with ace2 (Complex)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Ace2 (Complex from Homo sapiens)
JN.1 RBD with Q493E in complex with ACE2
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9iuu
Q-score: 0.509
Feng L, Sun Z, Zhang Y, Jian F, Yang S, Xia K, Yu L, Wang J, Shao F, Wang X, Cao Y
Cell Discov (2024) 10 pp. 123-123 [ Pubmed: 39616168 DOI: doi:10.1038/s41421-024-00752-2 ]
- Spike protein s1 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Angiotensin-converting enzyme 2 (69 kDa, Protein from Homo sapiens)
- Jn.1 rbd q493e (Complex from Severe acute respiratory syndrome coronavirus 2)
- Ace2 (Complex from Homo sapiens)
- Jn.1 rbd with q493e in complex with ace2 (Complex)
- Chloride ion (35 Da, Ligand)
BA.2.86 S-trimer in complex with Nab XG2v046
Zhu Q, Liu P, Liu S, Yue C, Wang X
Signal Transduct Target Ther (2024) 9 pp. 217-217 [ Pubmed: 39191733 DOI: doi:10.1038/s41392-024-01940-y ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Xg2v046 light chain (11 kDa, Protein from Homo sapiens)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Xg2v046 heavy chain (13 kDa, Protein from Homo sapiens)
- Ba.2.86 s-trimer in complex with nab xg2v046 (Complex from Severe acute respiratory syndrome coronavirus 2)
BA.2.86 S-trimer in complex with Nab XGv280
Zhu Q, Liu P, Liu S, Yue C, Wang X
Signal Transduct Target Ther (2024) 9 pp. 217-217 [ Pubmed: 39191733 DOI: doi:10.1038/s41392-024-01940-y ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Ba.2.86 s-trimer in complex with nab xgv280 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Xgv280 light chain (11 kDa, Protein from Homo sapiens)
- Xgv280 heavy chain (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of 6-subunit Smc5/6 arm region
Resolution: 6.02 Å
EM Method: Single-particle
Fitted PDBs: 8i21
Q-score: 0.127
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- E3 sumo-protein ligase mms21 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (126 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of 6-subunit smc5/6 arm region (Complex from Saccharomyces cerevisiae)
Cryo-EM structure of 5-subunit Smc5/6 hinge region
Resolution: 6.73 Å
EM Method: Single-particle
Fitted PDBs: 8i4u
Q-score: 0.189
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- E3 sumo-protein ligase mms21 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
- Cryo-em structure of 5-subunit smc5/6 hinge region (Complex from Saccharomyces cerevisiae S288c)
- Structural maintenance of chromosomes protein 5 (126 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)
Cryo-EM structure of 5-subunit Smc5/6 arm region
Resolution: 5.97 Å
EM Method: Single-particle
Fitted PDBs: 8i4v
Q-score: 0.108
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) 31 pp. 1532-1542 [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Cryo-em structure of 5-subunit smc5/6 arm region (Complex from Saccharomyces cerevisiae)
- E3 sumo-protein ligase mms21 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
- Dna repair protein kre29 (7 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 5 (123 kDa, Protein from Saccharomyces cerevisiae S288C)
- Structural maintenance of chromosomes protein 6 (128 kDa, Protein from Saccharomyces cerevisiae S288C)