Microtubule-associated kinesin-1 tail complex bound to AMPPNP, single-headed state
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8rhb
Q-score: 0.064
Atherton J, Chegkazi MS, Peirano E, Pozzer LS, Foran T, Steiner RA
bioRxiv (2024) [ DOI: doi:10.1101/2024.11.11.622991 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- 13pf microtubule bound to kif5bmoneiak in the presence of amppnp (246 MDa, Complex)
- Kinesin-1 heavy chain (Complex from Homo sapiens)
- 13pf microtubule (Complex from Sus scrofa)
- Kinesin-1 heavy chain (109 kDa, Protein from Homo sapiens)
Microtubule-associated kinesin-1 tail complex bound to AMPPNP, two-headed state
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8rhh
Q-score: 0.462
Atherton J, Chegkazi MS, Peirano E, Pozzer LS, Foran T, Steiner RA
bioRxiv (2024) [ DOI: doi:10.1101/2024.11.11.622991 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Kinesin-1 heavy chain (Complex from Homo sapiens)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- 13pf microtubule bound to kif5bmoneiak in the presence of amppnp (two-headed state) (246 MDa, Complex)
- 13pf microtubule (Complex from Sus scrofa)
- Kinesin-1 heavy chain (109 kDa, Protein from Homo sapiens)
Microtubule-associated kinesin-1 tail complex bound to ADP, single-headed state
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8rik
Q-score: 0.525
Atherton J, Chegkazi MS, Peirano E, Pozzer LS, Foran T, Steiner RA
bioRxiv (2024) [ DOI: doi:10.1101/2024.11.11.622991 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Kinesin-1 heavy chain (109 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 13pf microtubule bound to kif5bmoneiak in the presence of adp (246 MDa, Complex)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Kinesin-1 heavy chain (Complex from Homo sapiens)
- 13pf microtubule (Complex from Sus scrofa)
Microtubule-associated kinesin-1 tail complex bound to ADP, two-headed state
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8riz
Q-score: 0.421
Atherton J, Chegkazi MS, Peirano E, Pozzer LS, Foran T, Steiner RA
bioRxiv (2024) [ DOI: doi:10.1101/2024.11.11.622991 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Kinesin-1 heavy chain (109 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- 13pf microtubule bound to kif5bmoneiak in the presence of adp (two-headed state) (246 MDa, Complex)
- Kinesin-1 heavy chain (Complex from Homo sapiens)
- 13pf microtubule (Complex from Sus scrofa)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6rf8
Q-score: 0.449
Cook AD, Manka SW, Wang S, Moores CA, Atherton J
J Struct Biol (2020) 209 pp. 107402-107402 [ DOI: doi:10.1016/j.jsb.2019.10.004 Pubmed: 31610239 ]
- Neuronal migration protein doublecortin (11 kDa, Protein from Homo sapiens)
- Tubulin beta-2b chain (48 kDa, Protein from Bos taurus)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin alpha-1b chain (48 kDa, Protein from Bos taurus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 5-component complex of n-terminal dc domain (ndc) of ndc-ndc chimera (human doublecortin sequence) bound to 13-protofilament gdp-microtubule lattice site composed of 4 tubulin subunits (two alpha-subunits and two beta-subunits) (Complex)
- Tubulin (Complex from Bos taurus)
- Human doublecortin (Complex from Homo sapiens)
HsCKK (human CAMSAP1) decorated 13pf taxol-GDP microtubule
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6qus
Q-score: 0.454
Atherton J, Luo Y, Xiang S, Yang C, Rai A, Jiang K, Stangier M, Vemu A, Cook AD, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA
Nat Commun (2019) 10 pp. 5236-5236 [ Pubmed: 31748546 DOI: doi:10.1038/s41467-019-13247-6 ]
- Calmodulin-regulated spectrin-associated protein 1 (19 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin (Complex from Homo sapiens)
- Tubulin beta chain (49 kDa, Protein from Homo sapiens)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Calmodulin-regulated spectrin-associated protein 1 (Complex from Homo sapiens)
- Tubulin alpha-1b chain (50 kDa, Protein from Homo sapiens)
- Hsckk (human camsap1) decorated 13pf taxol-gdp microtubule (Complex)
NgCKK (N.Gruberi CKK) decorated 13pf taxol-GDP microtubule
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6quy
Q-score: 0.434
Atherton J, Luo Y, Xiang S, Yang C, Rai A, Jiang K, Stangier M, Vemu A, Cook AD, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA
Nat Commun (2019) 10 pp. 5236-5236 [ Pubmed: 31748546 DOI: doi:10.1038/s41467-019-13247-6 ]
- Ckk domain protein (20 kDa, Protein from Naegleria gruberi)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- N.gruberi ckk (Complex from Naegleria gruberi)
- Tubulin beta chain (49 kDa, Protein from Homo sapiens)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Homo sapiens)
- Tubulin (Complex from Homo sapiens)
- Ngckk (n.gruberi ckk) decorated 13pf taxol-gdp microtubule (Complex)
NgCKK (Naegleria Gruberi CKK) decorated 14pf taxol-GDP microtubule
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6qve
Q-score: 0.435
Atherton J, Luo Y, Xiang S, Yang C, Rai A, Jiang K, Stangier M, Vemu A, Cook AD, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA
Nat Commun (2019) 10 pp. 5236-5236 [ Pubmed: 31748546 DOI: doi:10.1038/s41467-019-13247-6 ]
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Predicted protein (20 kDa, Protein from Naegleria gruberi)
- Taxol (853 Da, Ligand)
- Beta1-tubulin (49 kDa, Protein from Homo sapiens)
- Ngckk (naegleria gruberi ckk) decorated 14pf taxol-gdp microtubule (Complex)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Naegleria gruberi ckk (Complex from Naegleria gruberi)
- Tubulin (Complex from Homo sapiens)
- Tubulin alpha-1b chain (50 kDa, Protein from Homo sapiens)
HsCKK (human CAMSAP1) decorated 14pf taxol-GDP microtubule
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6qvj
Q-score: 0.429
Atherton J, Luo Y, Xiang S, Yang C, Rai A, Jiang K, Stangier M, Vemu A, Cook AD, Wang S, Roll-Mecak A, Steinmetz MO, Akhmanova A, Baldus M, Moores CA
Nat Commun (2019) 10 pp. 5236-5236 [ Pubmed: 31748546 DOI: doi:10.1038/s41467-019-13247-6 ]
- Hsckk (human camsap1) decorated 14pf taxol-gdp microtubule (Complex)
- Calmodulin-regulated spectrin-associated protein 1 (19 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Camsap1 (Complex from Homo sapiens)
- Tubilin (Complex from Homo sapiens)
- Tubulin beta chain (49 kDa, Protein from Homo sapiens)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Homo sapiens)
Refined 13pf Hela Cell Tubulin microtubule (EML4-NTD decorated)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6i2i
Q-score: 0.422
Adib R, Montgomery JM, Atherton J, O'Regan L, Richards MW, Straatman KR, Roth D, Straube A, Bayliss R, Moores CA, Fry AM
Sci Signal (2019) 12 [ DOI: doi:10.1126/scisignal.aaw2939 Pubmed: 31409757 ]
- Magnesium ion (24 Da, Ligand)
- Alpha and beta-tubulin from hela cell (modelled) decorated with eml4-ntd (not modelled) (110 MDa, Complex from Homo sapiens)
- Tubulin beta chain (49 kDa, Protein from Homo sapiens)
- Taxol (853 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Homo sapiens)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)