Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C032
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7r8m
Q-score: 0.376
Muecksch F, Weisblum Y, Barnes CO, Schmidt F, Schaefer-Babajew D, Wang Z, C Lorenzi JC, Flyak AI, DeLaitsch AT, Huey-Tubman KE, Hou S, Schiffer CA, Gaebler C, Da Silva J, Poston D, Finkin S, Cho A, Cipolla M, Oliveira TY, Millard KG, Ramos V, Gazumyan A, Rutkowska M, Caskey M, Nussenzweig MC, Bjorkman PJ, Hatziioannou T, Bieniasz PD
Immunity (2021) 54 pp. 1853-1868.e7 [ DOI: doi:10.1016/j.immuni.2021.07.008 Pubmed: 34331873 ]
- Antibody-antigen complex of sars-cov-2 s 6p trimer with c032 fabs (Complex from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- C032 fab light chain (22 kDa, Protein from Homo sapiens)
- C032 fab heavy chain (24 kDa, Protein from Homo sapiens)
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C051
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 7r8n
Q-score: 0.304
Muecksch F, Weisblum Y, Barnes CO, Schmidt F, Schaefer-Babajew D, Wang Z, C Lorenzi JC, Flyak AI, DeLaitsch AT, Huey-Tubman KE, Hou S, Schiffer CA, Gaebler C, Da Silva J, Poston D, Finkin S, Cho A, Cipolla M, Oliveira TY, Millard KG, Ramos V, Gazumyan A, Rutkowska M, Caskey M, Nussenzweig MC, Bjorkman PJ, Hatziioannou T, Bieniasz PD
Immunity (2021) 54 pp. 1853-1868.e7 [ DOI: doi:10.1016/j.immuni.2021.07.008 Pubmed: 34331873 ]
- C051 fab light chain (22 kDa, Protein from Homo sapiens)
- Ternary complex of sars-cov-2 s 6p trimer with c051 fabs (720 kDa, Complex from Homo sapiens)
- C051 fab heavy chain (25 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C548
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7r8o
Q-score: 0.431
Muecksch F, Weisblum Y, Barnes CO, Schmidt F, Schaefer-Babajew D, Wang Z, C Lorenzi JC, Flyak AI, DeLaitsch AT, Huey-Tubman KE, Hou S, Schiffer CA, Gaebler C, Da Silva J, Poston D, Finkin S, Cho A, Cipolla M, Oliveira TY, Millard KG, Ramos V, Gazumyan A, Rutkowska M, Caskey M, Nussenzweig MC, Bjorkman PJ, Hatziioannou T, Bieniasz PD
Immunity (2021) 54 pp. 1853-1868.e7 [ DOI: doi:10.1016/j.immuni.2021.07.008 Pubmed: 34331873 ]
- C548 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Antibody-antigen complex of sars-cov-2 s 6p trimer with c548 fabs (Complex from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- C548 fab light chain (23 kDa, Protein from Homo sapiens)
Wang Z, Schmidt F, Weisblum Y, Muecksch F, Barnes CO, Finkin S, Schaefer-Babajew D, Cipolla M, Gaebler C, Lieberman JA, Oliveira TY, Yang Z, Abernathy ME, Huey-Tubman KE, Hurley A, Turroja M, West KA, Gordon K, Millard KG, Ramos V, Da Silva J, Xu J, Colbert RA, Patel R, Dizon J, Unson-O'Brien C, Shimeliovich I, Gazumyan A, Caskey M, Bjorkman PJ, Casellas R, Hatziioannou T, Bieniasz PD, Nussenzweig MC
Nature (2021) 592 pp. 616-622 [ DOI: doi:10.1038/s41586-021-03324-6 Pubmed: 33567448 ]
- Sars-cov-2 spike glycoprotein 6p trimer (585 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- C601 fab (50 kDa, Complex from Homo sapiens)
- Sars-cov-2 s 6p trimer complexed with monoclonal fab c601 (600 kDa, Complex)
Wang Z, Schmidt F, Weisblum Y, Muecksch F, Barnes CO, Finkin S, Schaefer-Babajew D, Cipolla M, Gaebler C, Lieberman JA, Oliveira TY, Yang Z, Abernathy ME, Huey-Tubman KE, Hurley A, Turroja M, West KA, Gordon K, Millard KG, Ramos V, Da Silva J, Xu J, Colbert RA, Patel R, Dizon J, Unson-O'Brien C, Shimeliovich I, Gazumyan A, Caskey M, Bjorkman PJ, Casellas R, Hatziioannou T, Bieniasz PD, Nussenzweig MC
Nature (2021) 592 pp. 616-622 [ DOI: doi:10.1038/s41586-021-03324-6 Pubmed: 33567448 ]
- C603 fab (50 kDa, Complex from Homo sapiens)
- Sars-cov-2 spike glycoprotein 6p trimer (585 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 s 6p trimer complexed with monoclonal fab c601 (600 kDa, Complex)
Wang Z, Schmidt F, Weisblum Y, Muecksch F, Barnes CO, Finkin S, Schaefer-Babajew D, Cipolla M, Gaebler C, Lieberman JA, Oliveira TY, Yang Z, Abernathy ME, Huey-Tubman KE, Hurley A, Turroja M, West KA, Gordon K, Millard KG, Ramos V, Da Silva J, Xu J, Colbert RA, Patel R, Dizon J, Unson-O'Brien C, Shimeliovich I, Gazumyan A, Caskey M, Bjorkman PJ, Casellas R, Hatziioannou T, Bieniasz PD, Nussenzweig MC
Nature (2021) 592 pp. 616-622 [ DOI: doi:10.1038/s41586-021-03324-6 Pubmed: 33567448 ]
- Sars-cov-2 spike glycoprotein 6p trimer (585 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- C643 fab (50 kDa, Complex from Homo sapiens)
- Sars-cov-2 s 6p trimer complexed with monoclonal fab c601 (600 kDa, Complex)
Wang Z, Schmidt F, Weisblum Y, Muecksch F, Barnes CO, Finkin S, Schaefer-Babajew D, Cipolla M, Gaebler C, Lieberman JA, Oliveira TY, Yang Z, Abernathy ME, Huey-Tubman KE, Hurley A, Turroja M, West KA, Gordon K, Millard KG, Ramos V, Da Silva J, Xu J, Colbert RA, Patel R, Dizon J, Unson-O'Brien C, Shimeliovich I, Gazumyan A, Caskey M, Bjorkman PJ, Casellas R, Hatziioannou T, Bieniasz PD, Nussenzweig MC
Nature (2021) 592 pp. 616-622 [ DOI: doi:10.1038/s41586-021-03324-6 Pubmed: 33567448 ]
- C663 fab (50 kDa, Complex from Homo sapiens)
- Sars-cov-2 spike glycoprotein 6p trimer (585 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 s 6p trimer complexed with monoclonal fab c601 (600 kDa, Complex)
Wang Z, Schmidt F, Weisblum Y, Muecksch F, Barnes CO, Finkin S, Schaefer-Babajew D, Cipolla M, Gaebler C, Lieberman JA, Oliveira TY, Yang Z, Abernathy ME, Huey-Tubman KE, Hurley A, Turroja M, West KA, Gordon K, Millard KG, Ramos V, Da Silva J, Xu J, Colbert RA, Patel R, Dizon J, Unson-O'Brien C, Shimeliovich I, Gazumyan A, Caskey M, Bjorkman PJ, Casellas R, Hatziioannou T, Bieniasz PD, Nussenzweig MC
Nature (2021) 592 pp. 616-622 [ DOI: doi:10.1038/s41586-021-03324-6 Pubmed: 33567448 ]
- Sars-cov-2 spike glycoprotein 6p trimer (585 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- C666 fab (50 kDa, Complex from Homo sapiens)
- Sars-cov-2 s 6p trimer complexed with monoclonal fab c601 (600 kDa, Complex)
Wang Z, Schmidt F, Weisblum Y, Muecksch F, Barnes CO, Finkin S, Schaefer-Babajew D, Cipolla M, Gaebler C, Lieberman JA, Oliveira TY, Yang Z, Abernathy ME, Huey-Tubman KE, Hurley A, Turroja M, West KA, Gordon K, Millard KG, Ramos V, Da Silva J, Xu J, Colbert RA, Patel R, Dizon J, Unson-O'Brien C, Shimeliovich I, Gazumyan A, Caskey M, Bjorkman PJ, Casellas R, Hatziioannou T, Bieniasz PD, Nussenzweig MC
bioRxiv (2021) [ Pubmed: 33501451 DOI: doi:10.1101/2021.01.15.426911 ]
- Sars-cov-2 spike glycoprotein 6p trimer (585 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- C669 fab (50 kDa, Complex from Homo sapiens)
- Sars-cov-2 s 6p trimer complexed with monoclonal fab c601 (600 kDa, Complex)
Wang Z, Schmidt F, Weisblum Y, Muecksch F, Barnes CO, Finkin S, Schaefer-Babajew D, Cipolla M, Gaebler C, Lieberman JA, Oliveira TY, Yang Z, Abernathy ME, Huey-Tubman KE, Hurley A, Turroja M, West KA, Gordon K, Millard KG, Ramos V, Da Silva J, Xu J, Colbert RA, Patel R, Dizon J, Unson-O'Brien C, Shimeliovich I, Gazumyan A, Caskey M, Bjorkman PJ, Casellas R, Hatziioannou T, Bieniasz PD, Nussenzweig MC
bioRxiv (2021) [ Pubmed: 33501451 DOI: doi:10.1101/2021.01.15.426911 ]
- C670 fab (50 kDa, Complex from Homo sapiens)
- Sars-cov-2 spike glycoprotein 6p trimer (585 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 s 6p trimer complexed with monoclonal fab c601 (600 kDa, Complex)