EM structure of ribosome-SRP-FtsY complex in "closed" state
Resolution: 5.7 Å
EM Method: Single-particle
Fitted PDBs: 5aka
Q-score: 0.156
von Loeffelholz O, Jiang Q, Ariosa A, Karuppasamy M, Huard K, Berger I, Shan SO, Schaffitzel C
PNAS (2015) 112 pp. 3943-3948 [ DOI: doi:10.1073/pnas.1424453112 Pubmed: 25775537 ]
Structural Basis of Signal Sequence Surveillance and Selection by the SRP-SR Complex
Resolution: 12.0 Å
EM Method: Single-particle
Fitted PDBs: 3zn8
Q-score: 0.042
von Loeffelholz O, Knoops K, Ariosa A, Zhang X, Karuppasamy M, Huard K, Schoehn G, Berger I, Shan SO, Schaffitzel C
Nat Struct Mol Biol (2013) 20 pp. 604-610 [ DOI: doi:10.1038/nsmb.2546 Pubmed: 23563142 ]
- 70s ribosome (2 MDa, Complex from Escherichia coli)
- Signal recognition particle receptor ftsy (145 kDa, Protein from Escherichia coli)
- Signal recognition particle protein (Protein from Escherichia coli)
- Dipeptidyl aminopeptidase b (Protein from Saccharomyces cerevisiae)
- Ribosome-srp-ftsy complex with espp nascent chain (2 MDa, Sample)
- Signal recognition particle 54 kda protein (Protein from Sulfolobus solfataricus)
- 4.5 s rna (Protein from Escherichia coli)
The architecture of human general transcription factor TFIID core complex
Bieniossek C, Papai G, Schaffitzel C, Garzoni F, Chaillet M, Scheer E, Papadopoulos P, Tora L, Schultz P, Berger I
Nature (2013) 493 pp. 699-702 [ DOI: doi:10.1038/nature11791 Pubmed: 23292512 ]
- Tata box binding protein (tbp)-associated factor 6 (70 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 5 (100 kDa, Protein from Homo sapiens)
- Recombinant human 3taf complex containing taf5, taf6 and taf9. (400 kDa, Sample)
- Tata box binding protein (tbp)-associated factor 9 (32 kDa, Protein from Homo sapiens)
The architecture of human general transcription factor TFIID core complex
Bieniossek C, Papai G, Schaffitzel C, Garzoni F, Chaillet M, Scheer E, Papadopoulos P, Tora L, Schultz P, Berger I
Nature (2013) 493 pp. 699-702 [ Pubmed: 23292512 DOI: doi:10.1038/nature11791 ]
- Recombinant human core-tfiid complex containing taf4, taf5, taf6, taf9 and taf12. (700 kDa, Sample)
- Tata box binding protein (tbp)-associated factor 12 (15 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 5 (100 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 9 (32 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 6 (70 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 4 (135 kDa, Protein from Homo sapiens)
The architecture of human general transcription factor TFIID core complex
Bieniossek C, Papai G, Schaffitzel C, Garzoni F, Chaillet M, Scheer E, Papadopoulos P, Tora L, Schultz P, Berger I
Nature (2013) 493 pp. 699-702 [ DOI: doi:10.1038/nature11791 Pubmed: 23292512 ]
- Tata box binding protein (tbp)-associated factor 9 (32 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 6 (70 kDa, Protein from Homo sapiens)
- Recombinant human 7taf complex containing taf4, taf5, taf6,, taf8, taf9, taf10 and taf12. (700 kDa, Sample)
- Tata box binding protein (tbp)-associated factor 4 (135 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 5 (100 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 12 (15 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 10 (43 kDa, Protein from Homo sapiens)
- Tata box binding protein (tbp)-associated factor 8 (43 kDa, Protein from Homo sapiens)
Structure of the E. coli signal recognition particle bound to a translating ribosome.
Resolution: 15.5 Å
EM Method: Single-particle
Fitted PDBs: 2iy3
Q-score: 0.017
Schaffitzel C, Oswald M, Berger I, Ishikawa T, Abrahams JP, Koerten HK, Koning RI, Ban N
Nature (2006) 444 pp. 503-506 [ DOI: doi:10.1038/nature05182 Pubmed: 17086205 ]
- P-site trna (25 kDa, RNA from Escherichia coli)
- E. coli srp (90 kDa, Ligand from Escherichia coli)
- E.coli 70s ribosome (2 MDa, Complex from Escherichia coli)
- E-site trna (25 kDa, RNA from Escherichia coli)
- E. coli ribosome nascent chain complexes and signal recognition particle (Sample)
- A-site trna (25 kDa, RNA from Escherichia coli)
Structure of the E. coli signal recognition particle bound to a translating ribosome.
Resolution: 20.0 Å
EM Method: Single-particle
Fitted PDBs: 2iy3
Q-score: 0.005
Schaffitzel C, Oswald M, Berger I, Ishikawa T, Abrahams JP, Koerten HK, Koning RI, Ban N
Nature (2006) 444 pp. 503-506 [ DOI: doi:10.1038/nature05182 Pubmed: 17086205 ]
- E.coli 70s ribosome (2 MDa, Complex from Escherichia coli)
- E. coli ribosome and signal recognition particle (Sample)
- E.coli srp (90 kDa, Ligand from Escherichia coli)