V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9bry
Q-score: 0.373
Wang C, Jiang W, Leitz J, Yang K, Esquivies L, Wang X, Shen X, Held RG, Adams DJ, Basta T, Hampton L, Jian R, Jiang L, Stowell MHB, Baumeister W, Guo Q, Brunger AT
Nature (2024) 631 pp. 899-904 [ Pubmed: 38838737 DOI: doi:10.1038/s41586-024-07610-x ]
- Renin receptor cytoplasmic fragment (32 kDa, Protein from Mus musculus)
- V-type proton atpase subunit s1 (51 kDa, Protein from Mus musculus)
- V-type proton atpase subunit e 2 (9 kDa, Protein from Mus musculus)
- V-type proton atpase 116 kda subunit a 1 (96 kDa, Protein from Mus musculus)
- V-type proton atpase 21 kda proteolipid subunit c'' (21 kDa, Protein from Mus musculus)
- Syptophysin gene knock-out mouse brain isolated glutamatergic synaptic vesicles (Cellular component from Mus musculus)
- V-type proton atpase 16 kda proteolipid subunit c (15 kDa, Protein from Mus musculus)
- Beta-d-mannopyranose (180 Da, Ligand)
- Ribonuclease kappa (11 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- V-type proton atpase subunit d 1 (40 kDa, Protein from Mus musculus)
V0-only V-ATPase and synaptophysin complex in mouse brain isolated synaptic vesicles
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 9brz
Q-score: 0.385
Wang C, Jiang W, Leitz J, Yang K, Esquivies L, Wang X, Shen X, Held RG, Adams DJ, Basta T, Hampton L, Jian R, Jiang L, Stowell MHB, Baumeister W, Guo Q, Brunger AT
Nature (2024) 631 pp. 899-904 [ Pubmed: 38838737 DOI: doi:10.1038/s41586-024-07610-x ]
- V-type proton atpase subunit s1 (51 kDa, Protein from Mus musculus)
- V-type proton atpase subunit e 2 (9 kDa, Protein from Mus musculus)
- V-type proton atpase subunit d 1 (40 kDa, Protein from Mus musculus)
- V-type proton atpase 116 kda subunit a 1 (96 kDa, Protein from Mus musculus)
- V-type proton atpase 21 kda proteolipid subunit c'' (21 kDa, Protein from Mus musculus)
- V-type proton atpase 16 kda proteolipid subunit c (15 kDa, Protein from Mus musculus)
- Synaptophysin (34 kDa, Protein from Mus musculus)
- Renin receptor cytoplasmic fragment (39 kDa, Protein from Mus musculus)
- Ribonuclease kappa (11 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse brain isolated glutamatergic synaptic vesicles (Cellular component from Mus musculus)
Resolution: 7.6 Å
EM Method: Single-particle
Fitted PDBs: 3j95
Q-score: 0.159
Zhao M, Wu S, Zhou Q, Vivona S, Cipriano DJ, Cheng Y, Brunger AT
Nature (2015) 518 pp. 61-67 [ Pubmed: 25581794 DOI: doi:10.1038/nature14148 ]
- Adp-bound n-ethylmaleimide sensitive factor (500 kDa, Sample)
- N-ethylmaleimide sensitive factor (83 kDa, Protein from Cricetulus griseus)