Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and rat STAT2 CCD
Resolution: 3.78 Å
EM Method: Single-particle
Fitted PDBs: 7zn7
Q-score: 0.395
Le-Trilling VTK, Banchenko S, Paydar D, Leipe PM, Binting L, Lauer S, Graziadei A, Klingen R, Gotthold C, Burger J, Bracht T, Sitek B, Jan Lebbink R, Malyshkina A, Mielke T, Rappsilber J, Spahn CM, Voigt S, Trilling M, Schwefel D
EMBO J (2023) 42 pp. e112351-e112351 [ DOI: doi:10.15252/embj.2022112351 Pubmed: 36762436 ]
- E27 (Complex from Murid betaherpesvirus 8)
- Zinc ion (65 Da, Ligand)
- B27a (76 kDa, Protein from Murid betaherpesvirus 8)
- Dna damage-binding protein 1 (Complex from Homo sapiens)
- Signal transducer and activator of transcription (97 kDa, Protein from Rattus norvegicus)
- Signal transducer and activator of transcription (Complex from Rattus norvegicus)
- Ternary complex of rcmv-e e27 with human ddb1 (deltabpb) and rat stat2 (100 kDa, Complex from Murid betaherpesvirus 8)
- Dna damage-binding protein 1 (93 kDa, Protein from Homo sapiens)
Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and full-length rat STAT2
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7znn
Q-score: 0.139
Le-Trilling VTK, Banchenko S, Paydar D, Leipe PM, Binting L, Lauer S, Graziadei A, Klingen R, Gotthold C, Burger J, Bracht T, Sitek B, Jan Lebbink R, Malyshkina A, Mielke T, Rappsilber J, Spahn CM, Voigt S, Trilling M, Schwefel D
EMBO J (2023) 42 pp. e112351-e112351 [ DOI: doi:10.15252/embj.2022112351 Pubmed: 36762436 ]
- E27 (Complex from Murid betaherpesvirus 8)
- Zinc ion (65 Da, Ligand)
- B27a (76 kDa, Protein from Murid betaherpesvirus 8)
- Dna damage-binding protein 1 (Complex from Homo sapiens)
- Signal transducer and activator of transcription (97 kDa, Protein from Rattus norvegicus)
- Signal transducer and activator of transcription (Complex from Rattus norvegicus)
- Ternary complex of rcmv-e e27 with human ddb1 (deltabpb) and rat stat2 (100 kDa, Complex from Murid betaherpesvirus 8)
- Dna damage-binding protein 1 (93 kDa, Protein from Homo sapiens)
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 6tg9
Q-score: 0.499
Radon C, Mittelstadt G, Duffus BR, Burger J, Hartmann T, Mielke T, Teutloff C, Leimkuhler S, Wendler P
Nat Commun (2020) 11 pp. 1912-1912 [ DOI: doi:10.1038/s41467-020-15614-0 Pubmed: 32313256 ]
- Formate dehydrogenase subunit alpha (104 kDa, Protein from Rhodobacter capsulatus)
- Formate dehydrogenase subunit gamma (15 kDa, Protein from Rhodobacter capsulatus)
- Iron/sulfur cluster (351 Da, Ligand)
- Flavin mononucleotide (456 Da, Ligand)
- Formate dehydrogenase subunit beta (52 kDa, Protein from Rhodobacter capsulatus)
- Hydrosulfuric acid (34 Da, Ligand)
- Nad-dependent formate dehydrogenase subunit delta (7 kDa, Protein from Rhodobacter capsulatus)
- 2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraaza-anthracen-4-one guanosine dinucleotide (740 Da, Ligand)
- 1,4-dihydronicotinamide adenine dinucleotide (665 Da, Ligand)
- Formate dehydrogenase, nadh reduced (360 kDa, Complex from Rhodobacter capsulatus)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Molybdenum(vi) ion (95 Da, Ligand)
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 6tga
Q-score: 0.496
Radon C, Mittelstadt G, Duffus BR, Burger J, Hartmann T, Mielke T, Teutloff C, Leimkuhler S, Wendler P
Nat Commun (2020) 11 pp. 1912-1912 [ DOI: doi:10.1038/s41467-020-15614-0 Pubmed: 32313256 ]
- Nad-dependent formate dehydrogenase subunit delta (7 kDa, Protein from Rhodobacter capsulatus)
- Formate dehydrogenase subunit beta (52 kDa, Protein from Rhodobacter capsulatus)
- Iron/sulfur cluster (351 Da, Ligand)
- Formate dehydrogenase subunit alpha (104 kDa, Protein from Rhodobacter capsulatus)
- Flavin mononucleotide (456 Da, Ligand)
- Hydrosulfuric acid (34 Da, Ligand)
- 2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraaza-anthracen-4-one guanosine dinucleotide (740 Da, Ligand)
- Formate dehydrogenase subunit gamma (15 kDa, Protein from Rhodobacter capsulatus)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Formate dehydrogenase, as isolated (360 kDa, Complex from Rhodobacter capsulatus)
- Molybdenum(vi) ion (95 Da, Ligand)
Needle complex of the Shigella type 3 secretion system
Resolution: 5.11 Å
EM Method: Single-particle
Fitted PDBs: 6rwy
Q-score: 0.154