Mammalian 80S HCV-IRES complex, Classical
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 5flx
Q-score: 0.261
Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
EMBO J (2015) 34 pp. 3042-3058 [ DOI: doi:10.15252/embj.201592469 Pubmed: 26604301 ]
- 80s ribosome (4 MDa, Complex from Oryctolagus cuniculus)
- Mammalian 80s-hcv-ires complex, classical (4 MDa, Sample)
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
Mammalian 80S HCV-IRES complex, Classical / no head tilt
Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
EMBO J (2015) 34 pp. 3042-3058 [ DOI: doi:10.15252/embj.201592469 Pubmed: 26604301 ]
- Mammalian 80s hcv-ires complex, classical / no head tilt (4 MDa, Sample)
- 80s ribosome (4 MDa, Complex from Oryctolagus cuniculus)
- Trna (2 kDa, RNA from Oryctolagus cuniculus)
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
Mammalian 40S HCV-IRES complex
Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
EMBO J (2015) 34 pp. 3042-3058 [ DOI: doi:10.15252/embj.201592469 Pubmed: 26604301 ]
- 40s ribosome (1 MDa, Complex from Oryctolagus cuniculus)
- Mammalian 40s-hcv-ires complex (1 MDa, Sample)
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
Mammalian 80S HCV-IRES complex, Rolled
Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
EMBO J (2015) 34 pp. 3042-3058 [ DOI: doi:10.15252/embj.201592469 Pubmed: 26604301 ]
- 80s ribosome (4 MDa, Complex from Oryctolagus cuniculus)
- Mammalian 80s hcv-ires complex, rotated (4 MDa, Sample)
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
Mammalian 80S HCV-IRES complex, Rotated
Yamamoto H, Collier M, Loerke J, Ismer J, Schmidt A, Hilal T, Sprink T, Yamamoto K, Mielke T, Burger J, Shaikh TR, Dabrowski M, Hildebrand PW, Scheerer P, Spahn CMT
EMBO J (2015) 34 pp. 3042-3058 [ DOI: doi:10.15252/embj.201592469 Pubmed: 26604301 ]
- 80s ribosome (4 MDa, Complex from Oryctolagus cuniculus)
- Mammalian 80s hcv-ires complex, rotated (4 MDa, Sample)
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
Mammalian 80S-HCV-IRES initiation complex with eIF5B PRE-like state
Resolution: 8.9 Å
EM Method: Single-particle
Fitted PDBs: 4ujd
Q-score: 0.14
Yamamoto H, Unbehaun A, Loerke J, Behrmann E, Collier M, Burger J, Mielke T, Spahn CMT
Nat Struct Mol Biol (2014) 21 pp. 721-727 [ DOI: doi:10.1038/NSMB.2859 Pubmed: 25064512 ]
- 80s ribosome (4 MDa, Complex from Oryctolagus cuniculus)
- Mammalian translation initiation 80s hcv-ires complex with eif5b; pre-like state (4 MDa, Sample)
- Trna (2 kDa, RNA from Oryctolagus cuniculus)
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
- Eif5b (160 kDa, Protein from Oryctolagus cuniculus)
Mammalian 80S-HCV-IRES initiation complex with eIF5B POST-like state
Resolution: 9.5 Å
EM Method: Single-particle
Fitted PDBs: 4ujc
Q-score: 0.14
Yamamoto H, Unbehaun A, Loerke J, Behrmann E, Collier M, Burger J, Mielke T, Spahn CMT
Nat Struct Mol Biol (2014) 21 pp. 721-727 [ DOI: doi:10.1038/NSMB.2859 Pubmed: 25064512 ]
- 80s ribosome (4 MDa, Complex from Oryctolagus cuniculus)
- Mammalian translation initiation 80s hcv-ires complex with eif5b; post-like state (4 MDa, Sample)
- Trna (2 kDa, RNA from Oryctolagus cuniculus)
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
- Eif5b (160 kDa, Protein from Oryctolagus cuniculus)