Mus musculus brain neocortex ribosome 60S bound to Ebp1
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6swa
Q-score: 0.449
Kraushar ML, Krupp F, Harnett D, Turko P, Ambrozkiewicz MC, Sprink T, Imami K, Gunnigmann M, Zinnall U, Vieira-Vieira CH, Schaub T, Munster-Wandowski A, Burger J, Borisova E, Yamamoto H, Rasin MR, Ohler U, Beule D, Mielke T, Tarabykin V, Landthaler M, Kramer G, Vida I, Selbach M, Spahn CMT
Mol Cell (2021) 81 pp. 304- [ DOI: doi:10.1016/j.molcel.2020.11.037 Pubmed: 33357414 ]
- 60s ribosomal protein l6 (22 kDa, Protein from Mus musculus)
- 60s ribosomal protein l40 (5 kDa, Protein from Mus musculus)
- Mus musculus postnatal day 0 brain neocortex 80s ribosome bound to ebp1 (3 MDa, Complex from Mus musculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Mus musculus)
- Ribosomal protein l37a (10 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13 (23 kDa, Protein from Mus musculus)
- 60s ribosomal protein l30 (10 kDa, Protein from Mus musculus)
- 60s ribosomal protein l37 (9 kDa, Protein from Mus musculus)
- Proliferation-associated protein 2g4 (39 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7a (26 kDa, Protein from Mus musculus)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l38 (8 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Mus musculus)
- Ribosomal protein l26 (15 kDa, Protein from Mus musculus)
- 5.8s ribosomal rna (50 kDa, RNA from Mus musculus)
- 60s ribosomal protein l19 (22 kDa, Protein from Mus musculus)
- 60s ribosomal protein l28 (14 kDa, Protein from Mus musculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Mus musculus)
- 60s ribosomal protein l31 (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l8 (27 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18a (20 kDa, Protein from Mus musculus)
- 60s ribosomal protein l18 (21 kDa, Protein from Mus musculus)
- 60s ribosomal protein l24 (7 kDa, Protein from Mus musculus)
- 60s ribosomal protein l22 (11 kDa, Protein from Mus musculus)
- 60s ribosomal protein l4 (41 kDa, Protein from Mus musculus)
- 28s ribosomal rna (1 MDa, RNA from Mus musculus)
- 60s ribosomal protein l29 (7 kDa, Protein from Mus musculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Mus musculus)
- 60s ribosomal protein l23 (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l34 (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l3 (45 kDa, Protein from Mus musculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Mus musculus)
- Ribosomal protein l39 (6 kDa, Protein from Mus musculus)
- Ribosomal protein l36a (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Mus musculus)
- 60s ribosomal protein l14 (16 kDa, Protein from Mus musculus)
- 60s ribosomal protein l17 (17 kDa, Protein from Mus musculus)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l32 (15 kDa, Protein from Mus musculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Mus musculus)
- 60s ribosomal protein l7 (27 kDa, Protein from Mus musculus)
- 60s ribosomal protein l13a (22 kDa, Protein from Mus musculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Mus musculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Mus musculus)
- 60s ribosomal protein l11 (19 kDa, Protein from Mus musculus)
- 5s ribosomal rna (38 kDa, RNA from Mus musculus)
- 60s ribosomal protein l23a (13 kDa, Protein from Mus musculus)
- 60s ribosomal protein l15 (24 kDa, Protein from Mus musculus)
cryoEM structure of the lambdaN Transcription Antitermination Complex at 3.7 A resolution.
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6gov
Q-score: 0.369
Krupp F, Said N, Huang YH, Loll B, Burger J, Mielke T, Spahn CMT, Wahl MC
Mol Cell (2019) 74 pp. 143-157.e5 [ Pubmed: 30795892 DOI: doi:10.1016/j.molcel.2019.01.016 ]
- Transcription antitermination complex (500 kDa, Complex from Escherichia coli)
map of the RNA polymerase lambda-based antitermination complex solved by cryo-EM
Resolution: 9.8 Å
EM Method: Single-particle
Fitted PDBs: 5ms0
Q-score: 0.069
Said N, Krupp F, Anedchenko E, Santos KF, Dybkov O, Huang YH, Lee CT, Loll B, Behrmann E, Burger J, Mielke T, Loerke J, Urlaub H, Spahn CMT, Weber G, Wahl MC
Nat Microbiol (2017) 2 pp. 17062-17062 [ DOI: doi:10.1038/nmicrobiol.2017.62 Pubmed: 28452979 ]
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- Rna transcription bubble (4 kDa, RNA from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Antitermination protein n (9 kDa, Protein from Escherichia phage lambda)
- Dnaii (11 kDa, DNA from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (36 kDa, Protein from Escherichia coli)
- Transcription antitermination protein nusb (15 kDa, Protein from Escherichia coli K-12)
- Nascent rna (9 kDa, RNA from Escherichia coli)
- Transcription termination/antitermination protein nusa (55 kDa, Protein from Escherichia coli K-12)
- Lambdan-dependent antitermination complex (Complex from Escherichia coli)
- Dna-directed rna polymerase subunit omega (10 kDa, Protein from Escherichia coli K-12)
- Dnai (8 kDa, DNA from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli K-12)
- Dna-directed rna polymerase subunit beta' (156 kDa, Protein from Escherichia coli K-12)
- Transcription termination/antitermination protein nusg (20 kDa, Protein from Escherichia coli K-12)