Cryogenic electron tomographs of Coxsackievirus A9
Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ
J Virol (2022) 96 [ DOI: 10.1128/jvi.01367-22 Pubmed: 36448797 ]
Image sets:
Cryogenic electron tomographs of Coxsackievirus A9 treated with endosomal ionic condition buffer
Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ
J Virol (2022) 96 [ DOI: 10.1128/jvi.01367-22 Pubmed: 36448797 ]
Image sets:
Cryogenic electron tomographs of Coxsackievirus A9 treated with fatty-acid-free BSA
Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ
J Virol (2022) 96 [ DOI: 10.1128/jvi.01367-22 Pubmed: 36448797 ]
Image sets:
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8at5
Q-score: 0.602
Domanska A, Plavec Z, Ruokolainen V, Loflund B, Marjomaki V, Butcher SJ
J Virol (2022) 96 pp. e0136722-e0136722 [ Pubmed: 36448797 DOI: doi:10.1128/jvi.01367-22 ]
- Palmitic acid (256 Da, Ligand)
- Capsid protein vp2 (28 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Capsid protein vp4 (7 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Capsid protein vp1 (33 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Coxsackievirus a9 (8 MDa, Virus from Coxsackievirus A9)
- Capsid protein vp3 (26 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Myristic acid (228 Da, Ligand)
Expanded Coxsackievirus A9 after 0.01% faf-BSA treatment
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8aw6
Q-score: 0.521
Domanska A, Plavec Z, Ruokolainen V, Loflund B, Marjomaki V, Butcher SJ
J Virol (2022) 96 pp. e0136722-e0136722 [ Pubmed: 36448797 DOI: doi:10.1128/jvi.01367-22 ]
- Capsid protein vp1 (33 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Coxsackievirus a9 (8 MDa, Virus from Coxsackievirus A9)
- Capsid protein vp3 (26 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Capsid protein vp2 (28 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
Expanded Coxsackievirus A9 after treatment with endosomal ionic buffer
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8axx
Q-score: 0.541
Domanska A, Plavec Z, Ruokolainen V, Loflund B, Marjomaki V, Butcher SJ
J Virol (2022) 96 pp. e0136722-e0136722 [ Pubmed: 36448797 DOI: doi:10.1128/jvi.01367-22 ]
- Capsid protein vp1 (33 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Coxsackievirus a9 (8 MDa, Virus from Coxsackievirus A9)
- Capsid protein vp3 (26 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
- Capsid protein vp2 (28 kDa, Protein from Human coxsackievirus A9 (strain Griggs))
Ruokolainen VP, Domanska A, Laajala MA, Pelliccia M, Butcher SJ, Marjomäki VS
J. Virol. (2019) [ DOI: 10.1128/jvi.00599-19 Pubmed: 31189702 ]
Image sets:
Extracellular factors prime enterovirus particles for uncoating
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6o06
Q-score: 0.348
Ruokolainen V, Domanska A, Laajala M, Pelliccia M, Butcher SJ, Marjomaki V
J Virol (2019) 93 [ DOI: doi:10.1128/JVI.00599-19 Pubmed: 31189702 ]
- Vp3 (26 kDa, Protein from Echovirus E1)
- Vp1 (31 kDa, Protein from Echovirus E1)
- Vp2 (28 kDa, Protein from Echovirus E1)
- Echovirus e1 (Virus from Echovirus E1)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6rjf
Q-score: 0.496
Ruokolainen V, Domanska A, Laajala M, Pelliccia M, Butcher SJ, Marjomaki V
J Virol (2019) 93 [ DOI: doi:10.1128/JVI.00599-19 Pubmed: 31189702 ]
- Vp4 (7 kDa, Protein from Echovirus E1)
- Palmitic acid (256 Da, Ligand)
- Vp1 (31 kDa, Protein from Echovirus E1)
- Vp3 (26 kDa, Protein from Echovirus E1)
- Vp2 (28 kDa, Protein from Echovirus E1)
- Echovirus e1 (Virus from Echovirus E1)