HIV-1 Envelope Glycoprotein BG505 SOSIP.664 expressed in HEK293F cells in complex with RM20A3 Fab
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6x9r
Q-score: 0.551
Berndsen ZT, Chakraborty S, Wang X, Cottrell CA, Torres JL, Diedrich JK, Lopez CA, Yates 3rd JR, van Gils MJ, Paulson JC, Gnanakaran S, Ward AB
PNAS (2020) 117 pp. 28014-28025 [ Pubmed: 33093196 DOI: doi:10.1073/pnas.2000260117 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv-1 envelope glycoprotein bg505 sosip.664 expressed in hek293f cells in complex with rm20a3 fab (Complex)
- Rm20a3 fab (Complex from Macaca mulatta)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp120 (57 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 (Complex from Human immunodeficiency virus 1)
- Rm20a3 fab heavy chain (13 kDa, Protein from Macaca mulatta)
- Rm20a3 fab light chain (13 kDa, Protein from Macaca mulatta)
HIV-1 Envelope Glycoprotein BG505 SOSIP.664 expressed in stable CHO cells in complex with RM20A3 Fab
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6x9s
Q-score: 0.547
Berndsen ZT, Chakraborty S, Wang X, Cottrell CA, Torres JL, Diedrich JK, Lopez CA, Yates 3rd JR, van Gils MJ, Paulson JC, Gnanakaran S, Ward AB
PNAS (2020) 117 pp. 28014-28025 [ Pubmed: 33093196 DOI: doi:10.1073/pnas.2000260117 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv-1 envelope glycoprotein bg505 sosip.664 expressed in stable cho cells in complex with rm20a3 fab (Complex)
- Rm20a3 fab (Complex from Macaca mulatta)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp120 (57 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 (Complex from Human immunodeficiency virus 1)
- Rm20a3 fab heavy chain (13 kDa, Protein from Macaca mulatta)
- Rm20a3 fab light chain (13 kDa, Protein from Macaca mulatta)
HIV-1 Envelope Glycoprotein BG505 SOSIP.664 expressed in HEK293S cells in complex with RM20A3 Fab
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6x9t
Q-score: 0.545
Berndsen ZT, Chakraborty S, Wang X, Cottrell CA, Torres JL, Diedrich JK, Lopez CA, Yates 3rd JR, van Gils MJ, Paulson JC, Gnanakaran S, Ward AB
PNAS (2020) 117 pp. 28014-28025 [ Pubmed: 33093196 DOI: doi:10.1073/pnas.2000260117 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv-1 envelope glycoprotein bg505 sosip.664 expressed in hek293s cells in complex with rm20a3 fab (Complex)
- Rm20a3 fab (Complex from Macaca mulatta)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp120 (57 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 (Complex from Human immunodeficiency virus 1)
- Rm20a3 fab heavy chain (13 kDa, Protein from Macaca mulatta)
- Rm20a3 fab light chain (13 kDa, Protein from Macaca mulatta)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6x9u
Q-score: 0.538
Berndsen ZT, Chakraborty S, Wang X, Cottrell CA, Torres JL, Diedrich JK, Lopez CA, Yates 3rd JR, van Gils MJ, Paulson JC, Gnanakaran S, Ward AB
PNAS (2020) 117 pp. 28014-28025 [ Pubmed: 33093196 DOI: doi:10.1073/pnas.2000260117 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Rm20a3 fab (Complex from Macaca mulatta)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp120 (57 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664, expressed in hek293s cells and partially deglycosylated by endoglycosidase h, in complex with rm20a3 fab (Complex)
- Hiv-1 envelope glycoprotein bg505 sosip.664 (Complex from Human immunodeficiency virus 1)
- Rm20a3 fab heavy chain (13 kDa, Protein from Macaca mulatta)
- Rm20a3 fab light chain (13 kDa, Protein from Macaca mulatta)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6x9v
Q-score: 0.487
Berndsen ZT, Chakraborty S, Wang X, Cottrell CA, Torres JL, Diedrich JK, Lopez CA, Yates 3rd JR, van Gils MJ, Paulson JC, Gnanakaran S, Ward AB
PNAS (2020) 117 pp. 28014-28025 [ Pubmed: 33093196 DOI: doi:10.1073/pnas.2000260117 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Rm20a3 fab (Complex from Macaca mulatta)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp120 (57 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664 gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope glycoprotein bg505 sosip.664, expressed in hek293s cells and deglycosylated by endoglycosidase h, in complex with rm20a3 fab (Complex)
- Hiv-1 envelope glycoprotein bg505 sosip.664 (Complex from Human immunodeficiency virus 1)
- Rm20a3 fab heavy chain (13 kDa, Protein from Macaca mulatta)
- Rm20a3 fab light chain (13 kDa, Protein from Macaca mulatta)