The Structure of Spiroplasma Virus 4
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 9cgm
Q-score: 0.647
Mietzsch M, Kailasan S, Bennett A, Chipman P, Fane B, Huiskonen JT, Clarke IN, McKenna R
Viruses (2024) 16 [ DOI: doi:10.3390/v16071103 Pubmed: 39066266 ]
- Dna binding protein orf8 (4 kDa, Protein from Spiromicrovirus SpV4)
- Spiromicrovirus spv4 (Virus from Spiromicrovirus SpV4)
- Capsid protein vp1 (62 kDa, Protein from Spiromicrovirus SpV4)
Avian Adeno-associated virus - empty capsid
Resolution: 2.54 Å
EM Method: Single-particle
Fitted PDBs: 8tex
Q-score: 0.572
Hsi J, Mietzsch M, Chipman P, Afione S, Zeher A, Huang R, Chiorini J, McKenna R
J Virol (2023) 97 pp. e0078023-e0078023 [ Pubmed: 37702486 DOI: doi:10.1128/jvi.00780-23 ]
Avian Adeno-associated virus - empty capsid
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8tey
Q-score: 0.591
Hsi J, Mietzsch M, Chipman P, Afione S, Zeher A, Huang R, Chiorini J, McKenna R
J Virol (2023) 97 pp. e0078023-e0078023 [ Pubmed: 37702486 DOI: doi:10.1128/jvi.00780-23 ]
- Capsid protein (60 kDa, Protein from Avian adeno-associated virus)
- Avian adeno-associated virus (Virus from Avian adeno-associated virus)
- 2'-deoxyadenosine-5'-monophosphate (331 Da, Ligand)
The Capsid of Canine Minute Virus
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 8tu0
Q-score: 0.564
Velez M, Mietzsch M, Hsi J, Bell L, Chipman P, Fu X, McKenna R
Viruses (2023) 15 [ DOI: doi:10.3390/v15091799 Pubmed: 37766206 ]
- Vp2 (63 kDa, Protein from Canine minute virus)
- Canine minute virus (Virus from Canine minute virus)
The Capsid of Porcine Bocavirus 1
Resolution: 2.31 Å
EM Method: Single-particle
Fitted PDBs: 8tu1
Q-score: 0.703
Velez M, Mietzsch M, Hsi J, Bell L, Chipman P, Fu X, McKenna R
Viruses (2023) 15 [ DOI: doi:10.3390/v15091799 Pubmed: 37766206 ]
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 8tu2
Q-score: 0.663
Velez M, Mietzsch M, Hsi J, Bell L, Chipman P, Fu X, McKenna R
Viruses (2023) 15 [ DOI: doi:10.3390/v15091799 Pubmed: 37766206 ]
- Vp2 (63 kDa, Protein from Rat bocavirus)
- Rat bocavirus (Virus from Rat bocavirus)
Resolution: 2.27 Å
EM Method: Single-particle
Fitted PDBs: 8fq4
Q-score: 0.693
Mietzsch M, Liu W, Ma K, Bennett A, Nelson AR, Gliwa K, Chipman P, Fu X, Bechler S, McKenna R, Viner R
Mol Ther Methods Clin Dev (2023) 29 pp. 460-472 [ Pubmed: 37273903 DOI: doi:10.1016/j.omtm.2023.05.002 ]
- Adeno-associated virus - 1 (3 MDa, Virus from Adeno-associated virus - 1)
- Capsid protein (58 kDa, Protein from Adeno-associated virus - 1)
Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 7lnk
Q-score: 0.635
Yu JC, Mietzsch M, Singh A, Jimenez Ybargollin A, Kailasan S, Chipman P, Bhattacharya N, Fakhiri J, Grimm D, Kapoor A, Kucinskaite-Kodze I, Zvirbliene A, Soderlund-Venermo M, McKenna R, Agbandje-McKenna M
Viruses (2021) 13 [ DOI: doi:10.3390/v13020330 Pubmed: 33672786 ]
- Capsid protein (57 kDa, Protein from Bocavirus gorilla/GBoV1/2009)
- Gorilla bocavirus (Virus from Gorilla bocavirus)
Atomic resolution structure of human bufavirus 1
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 6bwx
Q-score: 0.049
Ilyas M, Mietzsch M, Kailasan S, Vaisanen E, Luo M, Chipman P, Smith JK, Kurian J, Sousa D, McKenna R, Soderlund-Venermo M, Agbandje-McKenna M
Viruses (2018) 10 [ DOI: doi:10.3390/v10010022 Pubmed: 29300333 ]
- Bufavirus-1 (4 MDa, Virus from Bufavirus-1)
- Vp2 (61 kDa, Protein from Bufavirus-1)
Atomic resolution structure of human bufavirus 2
Resolution: 3.79 Å
EM Method: Single-particle
Fitted PDBs: 6bx0
Q-score: 0.447
Ilyas M, Mietzsch M, Kailasan S, Vaisanen E, Luo M, Chipman P, Smith JK, Kurian J, Sousa D, McKenna R, Soderlund-Venermo M, Agbandje-McKenna M
Viruses (2018) 10 [ DOI: doi:10.3390/v10010022 Pubmed: 29300333 ]
- Bufavirus-2 (Virus from Bufavirus-2)
- Vp2 (61 kDa, Protein from Bufavirus-2)